Mycoplasmopsis pulmonis: MYPU_0960
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Entry
MYPU_0960 CDS
T00055
Symbol
MYPU_0960
Name
(GenBank) EXCINUCLEASE ABC SUBUNIT B
KO
K03702
excinuclease ABC subunit B
Organism
mpu
Mycoplasmopsis pulmonis
Pathway
mpu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYPU_0960 (MYPU_0960)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpu03400
]
MYPU_0960 (MYPU_0960)
DNA repair and recombination proteins [BR:
mpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYPU_0960 (MYPU_0960)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYPU_0960 (MYPU_0960)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
AAA_7
AAA_19
Helicase_C_2
SLFN-g3_helicase
TsaE
nSTAND3
3A
T2SSE
NPHP3_N
AAA_30
TrwB_AAD_bind
AAA_16
AAA_14
AAA_5
FtsK_SpoIIIE
DUF87
Viral_helicase1
SRP54
Motif
Other DBs
NCBI-ProteinID:
CAC13269
UniProt:
P58174
LinkDB
All DBs
Position
complement(100778..102751)
Genome browser
AA seq
657 aa
AA seq
DB search
MFKLHSNYSPSGDQPRAIQELAEDIEKNKKHLVLQGVTGSGKTFTIANLIAKFNRTTLVL
SHNKTLASQLYSELKEFFPENRVEYFVSYFDFYRPEAYLPSTDTYIDKTSKTNNELDAMR
MSSLNALLTRKDTIVVSSVAAIYGAFNPQEYQKNFFSIEVGQELKRKDFFLDLVKRHYKR
NDVNLVPGSFSAKGDVVEIAPAWTSDFAIRVEFFGDEIEAIATIDPLNKTLKKRHKNYLI
FPANAYSTNKDIVSRVVLQVKEELIDRLDYFEKNNKLLEMQRLEQRVKSDMDSLEEFGIC
SGIENYARYIDGREQGEKPYTLLDYLPEEALVFIDESHMMVPQLNAMFNGDRSRKQNLVD
YGFRLPSALDNRPLTFSEFEEYKFPKIYISATPSEYEIEKADQKITKMIIRPTGLLDPII
ETRSKTNQVEDIYDELQKQKAKNERTLILTTTKRFSEELTRYFQEKGEKVAYIHSDHKTF
ERNEILRKLRKGVYDLVIGINLLREGIDLPEVSLVIILDADKESFLRNTKSLIQIVGRAS
RNSSGKVIFYADFVSKSMRETIEDNFEKRQIQIQYNKEHGIVPQTIIKDIPEPIEGHGFE
HSIEYFLSNEKKSKAQLKEKEKLILDLKKQMLEASQKMNYERAIHLRDLLIELGEKL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaactccattcaaattattctccttcaggagatcaaccaagagccattcaagag
ctagctgaagatattgaaaaaaacaaaaaacatcttgttcttcaaggagtaactggaagt
ggtaaaacttttaccattgctaatttaattgcaaagtttaatcgtacaactttagtgctt
tctcacaacaaaactttagcttctcaactctattcagaattaaaagaattttttcctgaa
aatagagttgagtattttgtttcatattttgatttttatcgtccagaggcttatcttcct
tcaactgatacttacattgataaaactagcaaaactaataatgaattagatgctatgcga
atgtcaagtttaaatgcacttttaactagaaaagacacaatagttgtttcatcagtggct
gctatttatggggcttttaatcctcaagagtatcaaaaaaactttttttcaatagaagta
ggtcaagagttaaaaagaaaagatttttttcttgatcttgtcaaaagacactataaaaga
aatgatgtaaatctagttcctggaagttttagtgcaaaaggagatgtagttgaaatagcc
cctgcttgaactagtgattttgccattagagtagaattttttggagatgaaattgaagca
attgctacaatagatcctttaaataaaactcttaaaaaaagacacaaaaactatttaatt
tttccagctaatgcatactcaacaaataaagatatagtctctagagttgttcttcaagta
aaagaagagttaattgatcgactagattattttgaaaaaaataataagcttcttgaaatg
caacgtttagagcaaagagttaaatcagatatggactctttagaagaatttggtatatgt
agcggaattgaaaattacgctcgttatattgatggaagagagcaaggagaaaagccttat
actcttttagattatcttcctgaagaagcacttgttttcattgatgaatctcacatgatg
gtaccacaattaaatgctatgtttaatggagatcgctcaagaaaacaaaaccttgttgac
tatggctttcgtcttccttcggctcttgataatagacctttaacatttagtgaatttgaa
gagtacaaattcccaaaaatctatatctcagctactccttctgaatatgaaattgaaaaa
gctgatcaaaaaataacaaagatgataattagaccaactggacttttagatcctattatt
gaaacaagatctaagacaaatcaagttgaagatatctatgatgaattacaaaaacaaaaa
gctaaaaatgaaagaactctaattcttacaactacaaaaagatttagtgaagagctaact
agatacttccaagaaaaaggtgaaaaagttgcatacattcactcagatcataaaactttt
gaacgtaatgaaattctaagaaagcttagaaaaggtgtttatgatttagtaattggtatt
aatttacttagagaaggtattgaccttcctgaagtttctttggttatcattttagacgct
gacaaagaatcatttttaagaaatacaaaaagcttaattcagatagttggaagagcttca
agaaatagctctggtaaggttattttttatgctgattttgtttcaaaaagtatgagagaa
acaattgaagataactttgaaaaaagacaaattcaaatccaatataacaaagaacacgga
attgttcctcaaaccataattaaagatattccagagccaattgaaggccatggatttgaa
cattcaattgagtattttttatcaaatgaaaaaaaatcaaaagctcaattaaaagaaaaa
gaaaagctgattttagatctaaaaaaacaaatgcttgaagcatctcaaaaaatgaattat
gaaagagccattcatcttcgagatttgcttattgaacttggagaaaaattataa
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