Mycoplasmopsis pulmonis: MYPU_5450
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Entry
MYPU_5450 CDS
T00055
Symbol
MYPU_5450
Name
(GenBank) DNA-DIRECTED RNA POLYMERASE BETA' CHAIN (TRANSCRIPTASE BETA' CHAIN) (RNA POLYMERASE BETA' SUBUNIT)
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpu
Mycoplasmopsis pulmonis
Pathway
mpu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYPU_5450 (MYPU_5450)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpu03021
]
MYPU_5450 (MYPU_5450)
03400 DNA repair and recombination proteins [BR:
mpu03400
]
MYPU_5450 (MYPU_5450)
Enzymes [BR:
mpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYPU_5450 (MYPU_5450)
Transcription machinery [BR:
mpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MYPU_5450 (MYPU_5450)
DNA repair and recombination proteins [BR:
mpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MYPU_5450 (MYPU_5450)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_RlmA
G1_gp67_C
Motif
Other DBs
NCBI-ProteinID:
CAC13718
UniProt:
Q98Q24
LinkDB
All DBs
Position
complement(669816..674096)
Genome browser
AA seq
1426 aa
AA seq
DB search
MPKTRKYSTVDEEKILKVSLSLATKEDVLEWSHGEVTKPETINYKSYKPERHGLFDELIF
GPATDYKCPICGKKYKKSNEGLTCNNTPQCEIEKPEILPKISRRSRMGHIALQTPVVHFW
FFKIDNSIISKLLVLRVGESNEYVSKNDLENIIYYKSHIVLDNGGLKSLPKNKIININNA
AQIYKDALIELRELNLNDADALEIIDGTINHLNDIVGSKVGNDYGVDFYELNEVIEEYSS
AKIQTGSKAIEFLLENIDLEEEQRKIKSKIKEINNLEKTSSSRKQDLSKLYKRLQVVESF
INSGQKPTSMLIYNLPVIPAELRPLVQLDGGRHSTSDINELYRRIIIRNNRLRKWIELNA
PTLITQNELRMIQEAVDALIDNSKKKPKPVTSKDNRNLKSISDALTGKKGRFRQNLLGKR
VDYSGRSVIVVGPELKMNQVGIPREMAAKLFEPWIIKELIDQEITLSVKSARKLIDNLNP
IIWPHVAKVIQGRPVLLNRAPTLHRLSIQAFEPVLIRGKAIKLHPLVTTAFNADFDGDQM
AVHVPISDEAVREAKELLFANRNILGPKDGEPIINPSQDMILGIYYLTIEIAGAKGEAKV
FQDVNSMLRAYEEGSVSLHARVAIPFKKLQKTFNLKGDKGYIFSTVGKFIFNQAFPENFP
FIFDSSVSSISDAQEYTKKYYIPYGLNIKETIQNTPINDALSKKDLSKIIRTIFDKYVPV
LTKEDVASVINDVNHTNYKDTSTKFANLVTTNKTALEYIHAESLSKFTTKHFVDVNKKLS
LKTPGNPNQPIWEVDQYVELLENVWFDYVNIVASVLDEIKDLGFKFSTKSGTSISIHDIE
VSDNKKERIKEGDDYTSELKSMYREGLLTDDERYSLTINKWSEVKDNIQNDLKKIVKNNP
LNPIFIMMNSGARSNMANYVQLAGIRGLMTNNTKILKSDAENERVVRSTVEIPVKSSFLD
GLTAYEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQGIVVTEKDCATQNGFVVKDI
VDNKTKTVIVPIRERIEGRFTIEDVKDKDGNVIVEKDTLIDAKMAEEIVEVHDVKEVNIR
SILGCEAKNGVCQKCFGKDLATSRIVSIGEAVGITASQSIGEPGTQLTMRTFHSGGVAGV
EDITGGFGRLTELIDAYRSPWGRPAIISKVDGIITEIKTPKDKNTNLVYITYLDQDDASQ
TEVVSVPKNRTLRVKVGDKIVKGQKIIDGPIILEELLEYGGPRKVQSYLLKEIQKIYRMQ
GIAINDKYIEIIISQMLSKIEISEPGDSDFIIGSLVNNLDFYNTNNELLEKGLEPAKGKV
VIHGAKRIPLLSNSFLAAASYQESAKILVNSSISSQQDFLVGVKENIILGKKIPAGTNSQ
YESKSKFDIRDPKEYFKDKSPQRHYKIEMDNEVSDMFNEFRISQNK
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaactagaaaatattcaacagttgatgaagaaaagattttaaaagttagctta
tctcttgcaactaaagaagatgttttagagtgatctcatggtgaagttaccaagccagag
acaattaactataaatcttataaaccagaaagacatgggcttttcgatgagttaattttt
ggtcctgcaactgactataaatgtcctatttgtggtaaaaaatacaaaaaaagcaatgaa
ggtctaacatgtaataacactcctcaatgtgaaattgaaaaacctgaaatattgccaaaa
atttcaagaagaagtagaatgggtcatattgctttacaaactcctgttgttcacttttga
tttttcaaaattgacaattcaattatttcgaaattattagtactaagagttggagagagc
aatgaatatgtttctaaaaatgacttagaaaacattatttactacaaaagccacattgtt
ttagataatggtggcctaaaaagcttaccaaaaaacaaaattatcaatattaataatgca
gctcaaatttataaagatgctcttattgaactaagagagctaaatttaaatgacgctgat
gctcttgaaattattgatggaaccattaatcaccttaatgatattgttggatcaaaagtt
ggaaatgactatggagttgatttttacgagctaaatgaagttattgaagagtactcaagt
gcaaaaattcaaactggatcaaaagccatagaatttttactagaaaatattgaccttgaa
gaagagcaaagaaaaattaaatctaaaattaaagaaattaataacttagaaaaaacttct
tcttcaagaaagcaagatctttccaaactttacaaaagattgcaagtagttgagtctttt
attaactctggacaaaaaccaactagcatgttaatttataacttgccggttattccagct
gagcttagacctttagttcaacttgatggaggaagacactcaacaagtgacattaatgag
ctatatagaagaattattattagaaataatcgtctaagaaaatgaattgaattaaatgct
cctactttgattactcaaaatgagcttagaatgattcaagaagcagttgatgctctaata
gataattctaagaaaaaacctaaacctgtaacttctaaagataatagaaatctaaagtct
atttcagatgctctaactggtaaaaaaggtcgttttagacaaaatctacttggaaaaagg
gttgactattcaggaagaagtgttattgttgttggtcctgaattaaaaatgaaccaagtt
ggtattccaagggaaatggctgctaaattatttgagccatgaattattaaagaattaata
gatcaagaaattaccttaagtgttaaaagtgctcgtaaattaattgataatttaaatcca
attatttgacctcatgttgcaaaagttatccaaggaagacctgttcttttaaaccgtgct
cctacattgcatcgtctttcaattcaagcttttgagccagttttaattagaggtaaggct
attaaacttcatccacttgtaactacagcttttaacgctgactttgatggtgatcaaatg
gcggttcatgttcctattagtgatgaagctgttagagaagctaaagaattgctttttgct
aatagaaatattttagggccaaaagatggtgagccaattattaacccttcacaggatatg
attttaggtatttattatctaactattgaaatagcaggggccaaaggagaggcaaaagtc
ttccaagatgtcaattcaatgctaagagcttatgaagaaggaagtgtttctcttcatgct
agagttgcaattccatttaaaaagttacaaaaaacctttaatttaaaaggtgataaaggt
tatattttctcaacagttggtaaattcatttttaaccaagcttttcctgaaaacttccca
tttatctttgactcatcagtttcatctataagtgatgctcaagaatatactaaaaaatat
tatattccttatggtttaaacataaaagagacaattcaaaacactcctattaatgatgct
ctttctaaaaaagatctttcaaaaattattagaaccatttttgacaaatatgttcctgtt
ttaacaaaagaagatgtagctagtgttattaatgatgtaaatcacacaaactataaagac
acttctacaaaatttgctaatttagttacaacaaacaaaacagctcttgaatacattcat
gcagaatcactttcaaaatttacaacaaaacactttgttgatgtaaataaaaaactttct
ctaaaaactccaggaaatccaaatcaaccaatttgagaagttgatcaatatgttgagctt
cttgaaaatgtttgatttgactatgtcaatattgtagcttctgtgcttgatgaaattaaa
gacttaggatttaaattctcaactaaatcaggaacatcaatttcaattcatgacattgaa
gtaagtgataacaaaaaagaaagaattaaagaaggtgatgattacaccagtgaacttaaa
tctatgtatcgtgaaggtcttttaaccgacgatgaaagatattctctaacaattaacaaa
tgatctgaagttaaagataacattcaaaatgaccttaagaaaattgttaaaaataatcca
ttaaatccaatttttattatgatgaattcaggggctcgttctaatatggccaactatgtt
caattagctggaattaggggactaatgactaacaatactaaaatccttaaatccgatgct
gaaaacgaaagggttgttcgttcaactgttgaaattccggttaaatcttcttttcttgat
ggactaactgcctatgagttttattcttcaacccacggagctcgtaaaggactaaccgat
actgctcttaacacagctaagtcaggatatttaactagaaggctagttgatgtggctcaa
ggaattgttgtaactgaaaaagattgtgctacacaaaatggatttgttgttaaagacatt
gttgacaataaaactaaaacagttattgttccaattagagaaagaattgaaggaagattt
acaattgaagatgtcaaagacaaagatggaaatgtcattgtagaaaaagatactttaatt
gatgcaaaaatggcagaagaaattgtcgaagttcatgatgttaaagaagtaaacattaga
tcaattttaggttgtgaggctaaaaacggagtttgtcaaaaatgttttggtaaagatctt
gcaacttcaagaattgtttcaattggtgaggcagttggtattacagctagccagtcaatt
ggtgagcctggaactcagctaaccatgcgtactttccactctggaggggtagctggtgta
gaggatattactggtggttttggacgtttaactgagcttattgatgcttatcgttctcct
tgaggaagaccagctattatttcaaaagttgatgggataataactgagattaaaactcca
aaagacaaaaatactaacttagtttatataacttatttagaccaagatgatgcaagtcaa
acagaagtagtttcagttcctaaaaatagaacacttcgtgttaaagttggtgacaaaatc
gttaaaggtcaaaaaattattgatggacctattattttagaagagcttctagaatatggt
ggacctagaaaagttcaaagttatctacttaaagaaattcaaaaaatttatagaatgcaa
ggtattgcaattaatgacaaatacattgaaattatcattagccaaatgctttcaaaaatt
gaaatttctgaaccaggagatagtgactttattattggttcacttgtaaataaccttgat
ttttacaacacaaataacgagcttttagaaaaaggacttgaacctgccaaaggtaaagtg
gtaattcatggagctaaaagaatcccacttctttcaaattcattccttgcagcggcaagt
tatcaagaatcggctaaaattttagttaattcatcaatttcatctcaacaagacttttta
gttggggttaaagaaaacattattctaggtaagaaaattccagctggaacaaactctcaa
tatgaaagtaaatctaaatttgacattagagatccaaaagaatacttcaaagataaatct
cctcaaagacactacaaaattgaaatggacaatgaagtctcagacatgttcaatgaattt
agaatttctcaaaataaataa
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