Mustela putorius furo (domestic ferret): 101676171
Help
Entry
101676171 CDS
T07239
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mpuf
Mustela putorius furo (domestic ferret)
Pathway
mpuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101676171 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpuf03019
]
101676171 (PNLDC1)
Enzymes [BR:
mpuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101676171 (PNLDC1)
Messenger RNA biogenesis [BR:
mpuf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101676171 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
101676171
NCBI-ProteinID:
XP_004770906
Ensembl:
ENSMPUG00000004920
UniProt:
M3Y0M9
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDVGADEFEQSLPLLQELVLGADFVGLDIEFTGLRSNLSRPQQISLFDLPSDWYLKTRHS
VQQFTICQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIKHNILTGNWRVRSSLDKDQIKVVIDEVTRWLDLAEEGDW
MTLPGITGFQAFEVQLVLRQALPDIWTVPRDQGIIVKKVSKQHRWYLENTSGDRASCWKE
KILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKLNIHNLFPV
LIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTRNSGPVVIHASKCEKYVETKYPH
EAAYDAFLCGSVLLKVAHLLAWRVRGAGSMPEPSFPLYLDVLAPYVNQVNLIRAGVPKIN
FSGPDCPSIRPPVLLLRVRKWPGVNEQQVYREFQNLCKFDVRRLSRSQFLLLTNKFKDAR
SILKEYRGHPTLQVSLYRYWRHSPNISCLLQVCGVVTTWALLALLLGRPGH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgagcagagtctccctctgctgcaggagctcgtcttg
ggcgctgacttcgtgggtctggacatagaattcacgggccttcgctctaacctgtcccgc
ccccagcagatcagtctctttgacttgccctcggactggtatctaaaaacccgccacagt
gtccagcagttcacaatctgtcagattggattgtctgtgttttccagtattgaaggagag
tcaaacaagtatgtagcccattcatgtaacttctttctcttcccgacgacatttgggatt
ttggattcagaattctctttccaggcttctagtgttcagtttttgaatcagtatggcttc
gattacaacaagtttctcaaaaatgggatcccatatatgaatgaagagcaggagaagaaa
attaaacacaacatcctgactggaaactggagagttcgcagttctctggataaagaccag
atcaaggtggtgatcgatgaggtgacaaggtggctggacttggcagaggagggcgactgg
atgactctccctggtatcactggcttccaggcttttgaggtccagctggtgctgcggcag
gccctccccgacatctggacggtcccgagagaccaggggataatagtgaaaaaagtgagc
aaacagcatcggtggtatcttgagaacacctccggtgatcgagcgagctgttggaaggag
aagattcttctctctgcaaggggtttttccgtgtttttccagatgctggtgaaagcccaa
aagcccttagtgggccacaacatgatgatggacctgctgcatctccacgagaagttcttc
aggccactcccagaaagctatgatcagtttaagctgaacatccacaacctgtttcctgtt
ctcattgacaccaagaacgtgaccaaggatatctggaaggaactgaatttcccaagggtt
tcaaatctttcagaagtttatgaagtcctaaacagcgacttgaatccgaccagaaattcc
gggccagtggtcattcacgcgagcaagtgtgaaaaatacgtggagaccaagtacccccac
gaggccgcgtacgatgccttcctctgtggatcagttctcctgaaagtggcccacttgctc
gcatggagagtgcgcggtgccggctccatgccagagccctccttccctctgtacctcgac
gtgctggctccctatgtgaaccaggtgaatctaatccgagccggggtccctaagattaat
ttctcaggtccagactgccccagtatccgacctcccgtcctcctcctccgtgtccggaag
tggccaggggtcaacgagcagcaggtctaccgtgagtttcagaatctttgcaagttcgat
gtgcggcgactctcgcggagccagttcctgcttttgaccaataagtttaaggatgctcgg
agcatcctgaaggagtacaggggccaccccaccctgcaggtgtccctgtaccggtactgg
aggcactccccgaacatcagctgcctgttgcaggtctgtggcgtggtcaccacctgggcc
ctcctggcgcttctcctcggaagacctggccactga
DBGET
integrated database retrieval system
