Mustela putorius furo (domestic ferret): 101682567
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Entry
101682567 CDS
T07239
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mpuf
Mustela putorius furo (domestic ferret)
Pathway
mpuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101682567 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpuf03019
]
101682567 (PARN)
Enzymes [BR:
mpuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101682567 (PARN)
Messenger RNA biogenesis [BR:
mpuf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101682567 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
RRM_1
NCBP3
T6PP_C
Motif
Other DBs
NCBI-GeneID:
101682567
NCBI-ProteinID:
XP_004750403
Ensembl:
ENSMPUG00000014464
UniProt:
M3YSP4
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDHTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVDTLETEKKERYIV
ISKVDEEERKRREQQKLAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTATEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHEEKQIKRKWTEDTWQEVERKRLK
TQSMSYALQNHYYHANSLTATGTVEKRSLSPSPAEADLEARVSGEISDAELEPTESCAEP
VSEGRKKAKKLKRMKKDLSPAGGIPDSPAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcagggatcagtgatggaccttcagta
actgcattgacaaatggttttgacactccggaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacgtttaagtatgaccacacagat
tcaaagtatataacaaagtcattcaacttctacgtgttcccaaaacccttcaatagatcc
tcgccagatgtcaagtttgtttgtcagagttcaagcattgactttctagcaagccaagga
tttgattttaataaagttttccgcaatggaattccgtatttaaatcaggaagaagaaagg
cagttaagagagcagtatgatgaaaaacgtctgcagtccaatggcgcaggagcgctgtct
tacgtatctccaaacacttccaaatgtcctgtgacaattcctgaggaccagaagaagttc
atcgaccaagtggtagagaaaatagaagatttactacaaagtgaagaaaacaagaacttg
gatttagagccatgtactgggttccaaaggaaactgatttatcagactttgagctggaag
tatcccaaaggcatccacgttgacactttagaaactgaaaagaaagagcgctacatcgtc
atcagcaaagtagatgaagaggagcgtaagaggagggagcagcagaaactcgctaaggaa
caggaagaactgaatgatgctgtggggttttctagagtcatccacgccattgccaattcg
ggaaagctcgttattggacacaacatgctcttggatgtcatgcacacagttcatcagttc
tactgccctctgcctgcggacctaaatgaatttaaggagatgacaacgtgtgttttccct
agactcttggatacaaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatctctcgcagaattggaaaagcggttaaaagagacacctttcaaccctcctaaagtt
gaaagtgcggaaggttttccaagttacgacacagctacggagcagctccacgaggccggc
tatgatgcttatatcacagggctgtgcttcatctccatggcgaactacctaggttctttt
cttagccctccaaaaattcatgtgtctgccagatcaaaactcattgaacctttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggcccagacttg
caaccgaaacgggatcatgttctccatgtgaccttccccaaagagtggaaaaccagcgac
ctttaccaacttttcagtgcctttggtaacattcagatatcctggatcgatgacacatca
gcctttgtttctctcagccagcccgaacaagtacagattgctgtcaataccagcaaatat
gcagaaagctatcggatccagacctatgccgaatatgtagggaaaaaacacgaggagaag
cagatcaagaggaagtggacagaagatacctggcaggaggttgagagaaaacgattaaag
actcagtccatgtcctacgctctgcagaatcactactaccacgccaacagtcttacagcc
accggcacggtagaaaagagaagcctgagtcccagcccagcagaagctgacttggaggcc
agagtatcgggggagatttctgacgccgagctcgagcccacagagtcctgtgcagaaccc
gtctccgagggaaggaaaaaggccaagaagttaaaaagaatgaagaaggacctttcacca
gcaggaggcatccccgacagcccggccaagctcttcgaagtccccgacacgtggtaa
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