KEGG   Mustela putorius furo (domestic ferret): 101689626
Entry
101689626         CDS       T07239                                 
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
mpuf  Mustela putorius furo (domestic ferret)
Pathway
mpuf03013  Nucleocytoplasmic transport
mpuf03015  mRNA surveillance pathway
mpuf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpuf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101689626 (DDX39B)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101689626 (DDX39B)
   03015 mRNA surveillance pathway
    101689626 (DDX39B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpuf03019]
    101689626 (DDX39B)
   03041 Spliceosome [BR:mpuf03041]
    101689626 (DDX39B)
Enzymes [BR:mpuf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101689626 (DDX39B)
Messenger RNA biogenesis [BR:mpuf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101689626 (DDX39B)
Spliceosome [BR:mpuf03041]
 Complex C
  Other components
   EJC/TREX
    101689626 (DDX39B)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101689626 (DDX39B)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 101689626
NCBI-ProteinID: XP_012905690
Ensembl: ENSMPUG00000011407
UniProt: A0A8U0NM79
LinkDB
Position
Unknown
AA seq 435 aa
MRSPCLVMAENDVDNELLDYEEDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLK
PELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQ
VSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP
GRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK
EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIF
VKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDI
ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISE
LPDEIDISSYIEQTR
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgcgctcgccttgcttagttatggcagagaatgatgtggacaatgagctcttggactat
gaagaagatgaggtggagacagcagctgggggagatggggctgaggcccctgccaagaag
gatgtgaagggctcctatgtctccatccacagctctggctttcgtgacttcctgctgaag
ccagagttgctccgggccattgtcgactgtggctttgagcatccatcagaagtccagcat
gagtgcatccctcaggccattctgggaatggatgtcctgtgccaggccaagtcaggcatg
gggaagacagcggtgtttgtgctggccacactgcagcagctggagccagttactggacag
gtgtctgtgctcgtgatgtgtcacactcgggagttggcttttcagatcagcaaggaatat
gagcgcttctctaaatacatgcccaatgtcaaggtcgcggtgttttttggtggtctgtct
atcaagaaggatgaagaggtgctgaagaagaactgcccgcatattgttgtggggacccct
ggccgcatcctcgccctggctcgaaataagagcctcaatctcaaacacattaaacacttt
atcttggatgaatgtgataagatgcttgaacagctcgacatgcgtcgggatgtccaggaa
atttttcgcatgaccccccatgagaagcaggtcatgatgttcagtgctaccttgagcaaa
gagatccgtcccgtctgccgcaagttcatgcaagacccaatggagatcttcgtggatgat
gagacgaagctgacgctgcatgggttgcagcagtactacgtgaaactgaaggacaacgag
aagaaccggaagctctttgaccttctcgatgtccttgagttcaatcaggtggtgatcttt
gtgaagtctgtgcagcgttgcattgccctggcccagctcctagtggagcagaacttccca
gccattgccatccaccgagggatgccccaggaggagaggctttctcggtatcagcagttt
aaagattttcaacgacgaattcttgtggctaccaacctatttggccgaggcatggatatt
gagcgggtgaacattgccttcaattatgacatgcctgaggattctgacacctacctgcat
agggtggcccgagcaggtcggtttggcactaagggcttggccatcacgtttgtgtcagat
gaaaatgatgccaagatcctcaatgatgtgcaggatcgatttgaagtcaatattagtgag
ctgcccgatgagatagacatttcctcttacattgaacagacgcggtag

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