KEGG   Mustela putorius furo (domestic ferret): 101691332
Entry
101691332         CDS       T07239                                 
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W isoform X1
  KO
K12599  antiviral helicase SKI2 [EC:5.6.2.6]
Organism
mpuf  Mustela putorius furo (domestic ferret)
Pathway
mpuf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpuf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101691332 (SKIV2L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpuf03019]
    101691332 (SKIV2L)
Enzymes [BR:mpuf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     101691332 (SKIV2L)
Messenger RNA biogenesis [BR:mpuf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101691332 (SKIV2L)
  mRNA degradation factors
   3'-5' decay
    Ski complex
     101691332 (SKIV2L)
SSDB
Motif
Pfam: DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII HAS-barrel DUF3516
Other DBs
NCBI-GeneID: 101691332
NCBI-ProteinID: XP_004780978
Ensembl: ENSMPUG00000010567
UniProt: M3YGN2
LinkDB
Position
Unknown
AA seq 1246 aa
MMETERLVLPPPDPLDLPLRPVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLATQGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPISQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE
QDLLTVPPGFKKGVDFTPKDHPAPASGLLSLSRLLEPLDLGGGDEDETEAVGQPGIPRGD
TVAASPCSASMARASSLEDLVLKETSPAVSPPEPPKPLPQEQWAIPVDVTSPVGDFYRLI
PQPAFQWSFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLNSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSAFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKRLGALEEPDTTGQLVDLPEYYSWGEELTETRSLIQQRIMESVNGLKSLS
AGRVVVVKNQEYHNTLGVILQVSSNSTSRVFTTLVLCDKPVSEDPQERPPATPDVPYPDD
LVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRVNGEKILEDFSRRQQPKFKKDPPIAA
VTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIGSAQCVHSPRF
SAQYLKLQERVQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEVGTVKLAGRV
ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgatggagaccgagcgactcgtgctacctcctccagatcccctggatctgccccttcgg
ccggtggagctgggatgcacggggcgctgggagctgctcaatgtgcctggggcaccagag
agcacccttccccacggcctccctccatgtgccccagatctgcagcaggaagcagaacag
ctgtttttgtcatctccagcctggttgcctctgcatggtgtggagcactctgcccgaaaa
tggcagaggaaaatggatccctggtcactcttggccacacagggggccccagtgccctcc
gaccttcaggcccagagacacccaaccacaggccagattctgggctacaaagaggtcctg
ttggagaatacgaacctatcagccaccacctccttgtctcttcgccggcccccaggacct
atctcccagtccctgtgggggaatccaacacagtaccctttctggccaggtggaatggat
gagcccaccataacagatctaagcactcgggaggaggctgaggaggagatagactttgag
caagatcttcttactgttccgcctggcttcaaaaaaggtgtggactttacaccaaaggat
cacccagctccagcttctggcttgctcagcctcagccgtttgctggagcctctggatttg
ggtgggggagacgaggatgaaactgaggcagtgggacagccaggaattcccagaggggac
actgtggctgcctccccctgcagtgcttccatggcccgagcaagcagcttggaggaccta
gtgttgaaggaaacatccccagctgtatcccctccagagccccccaaacccctgcctcag
gagcagtgggcgattcctgtggatgtcacctcccctgttggtgatttctaccgcctcatt
ccccagccggccttccagtggtcatttgagccggatgtgttccagaagcaggccatcctg
cacttggagcggcatgactctgtcttcgttgcggctcacacatctgcggggaagacggtt
gtggctgaatatgccattgcccttgcccagaaacacatgactcgcaccatttacacatcg
cccatcaaggccctgagcaaccagaagttccgagactttcgaaacacattcggggatgtg
ggattgctcactggggatgtgcagctgcacccagaggcctcctgcctcattatgacaaca
gagatccttcgctccatgctgtacagcggctcagatgtcatccgggacctggagtgggtc
atctttgatgaggttcactatatcaatgatgctgagcgtggggttgtgtgggaggaggtg
ctcatcatgctccctgaccatgtctccatcatccttctgagtgccaccgtccctaatgcc
cttgagttcgccgactggatcgggcgactgaaacgtcgccagatatatgtgatcagcact
gttgcgcgccccgttcccctggagcattatctcttcacggggaacagccccaagacccag
ggggagctttttctgttgctggactcccgaggtgccttccatacaaaggggtactatgcc
gctgtggaggccaagaaggagcggatgagcaaacatgcccagacctttggggccaagcag
cccacgcatcagggggggcccgcacaggaccgtggtgtatacctgtcccttctggcctcc
ctccgcacccgcgcacagctgcctgtggtggtgttcaccttctcccggggtcgctgtgat
gagcaagcctcgggcctcaactcccttgacctcaccacgagttcagagaagagtgagatt
cacctcttcctgcagcgctgccttgcccgcctccgtggctctgaccgccagctgccccag
gtcctgcacatgtccgaacttctgcaccgcggcctgggtgtgcaccacagtggcatcctg
cctattcttaaagagatcgtggagatgcttttcagtcgaggcctggtcaaggtcttgttt
gccacagagacttttgccatgggtgtaaatatgcctgcccgaacagtggtgtttgactcc
atgcggaagcatgatggctccgccttccgggacctgctccctggagagtacgtgcagatg
gcgggccgggcaggccggaggggcctggaccccaccggcactgtcatcctgctctgcaag
ggccgtgtgcctgaaatggcagacctgcaccgcatgatgatggggaagccatcacagctg
cagtcccagttccgactcacatataccatgatcctgaacctgctgcgggtggacgccctc
agggtggaggacatgatgaagagaagcttctctgagtttccatcccgcaaggacagcaag
gctcatgaacaggctctagctgaactgaccaagagactaggggccttggaggaacctgac
acgactggccaattggttgacctgcctgagtattacagctggggggaggaactgacagag
acccggagcctgatccagcagcgcatcatggagtctgtgaatgggctcaagtctctctca
gcgggaagggtggtggttgtgaagaatcaggagtatcacaacacattgggtgtgatcctg
caggtctcctcgaactccaccagcagggtatttacaaccctggtcttgtgtgataagcct
gtgtctgaggacccacaggagaggccaccagccaccccagatgtgccctaccccgatgat
cttgtgggattcaagctgttcctgcctgaaggaccttgtgaccacacagtggccaagctc
cagccaggagatgtggccgccatcaccaccaaggttctccgggtgaatggggagaagatc
ttggaggacttcagcaggaggcagcaaccaaaattcaagaaggatcctcccattgcagct
gtgaccactgctgtgcaggaactgctgcgtctggctcaggcctacccagcgggaccccct
acccttgaccctgtcaatgacctgcagctcaaagatgtatcagtggtagagggggggctc
cgagcccggaagctggaggagctgattggcagtgctcagtgtgtgcacagccctcgtttc
tctgcccagtacctgaagctgcaggagcgcgtgcagatacagaaggagatggagcgacta
cgcttcctgctgtcagatcagtcactgctgctgctcccagagtatcaccagcgagtagag
gtgctccgaaccctgggttatgtagacgaggtgggcacggtgaagctggcagggcgggtg
gcttgtgccatgagcagccatgagctgctcctcactgagctcatgtttgacaatgctctg
agtgccctgcggccggaggagattgcagccctgctctccggcctggtctgccagagccct
ggggacccaggggagcagctcccaagcaccctcaaacagggagttgaacgtgtccgggct
gtggccaagcggattggtgaggtccaggtggcctgtggcttgaaccagacagtggaggaa
tttgtgggggagctgaattttgggcttgtcgaagttgtgtacgagtgggcccggggcatg
cccttctccgagctggcggggctttcggggacccctgagggcctggtggtccgctgcatc
cagcgcctggctgagatgtgtcgctcactgaggggggcagcccgccttgtaggtgagcct
gtgttaggtgccaagatggagacagcagctaccctgctacggagggacatcgtctttgca
gccagcctgtacactcagtga

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