Marichromatium purpuratum: MARPU_01690
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Entry
MARPU_01690 CDS
T03650
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mpur
Marichromatium purpuratum
Pathway
mpur02020
Two-component system
mpur02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MARPU_01690
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MARPU_01690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpur03021
]
MARPU_01690
Transcription machinery [BR:
mpur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MARPU_01690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
HTH_IclR
RRP4_S1
Motif
Other DBs
NCBI-ProteinID:
AHF02706
UniProt:
W0E0U1
LinkDB
All DBs
Position
complement(365100..366572)
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AA seq
490 aa
AA seq
DB search
MKQTIQLRLGQHLTMTPQLQQAIRLLQLSTLELQKEIQEALDSNLMLEEAEEADRFAANG
EDSGNGAHESPPSDEQGSAERELQGETNEIPDELPVDTQWADVYDGYLPPSIQGSAENAD
FDPFLHQSRPQTLHDHLIWQLNLIRLSERDEMIAEAVIDAIDARGYLRADLDELLATIGD
DQISLEEIATMVHRVQSFDPPGVGARDLAECLQIQLRQLPAETPQRDLALAICRDGFEHL
PRKDIAALMRRFKQTEPEIRGALTLICQLNPHPGDLIAQEPPEYVVPDIFVRRQNGRWSV
ELNPESTPKLRVNADYARLIRRADTSSDSVTMRNHLQEARWFIKSLASRNDTVLRVGAKI
VEMQQAFFEHGEEAMRPMVLRDVAEALELHESTVSRVTTQKYMHTPRGTLEFKYFFSSHV
STTSGGECSSTAIRALIRKLIAAEPARKPLSDSKIAAELADRGIQVARRTVAKYREAMGI
PASNERKRLA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaccatccagcttcgcctcggccaacacctgacgatgacgccccagctgcag
caggcgattcgcctcctgcagctgtcgacgctcgagctgcagaaggagatccaggaggcg
ctggactccaacctgatgctcgaggaggccgaggaggccgaccgcttcgccgccaacggt
gaggacagtggcaatggcgcacacgagtctccgcccagcgatgagcagggcagcgccgag
cgtgagctccagggcgagaccaacgagatccccgatgagctcccggtcgacacccagtgg
gccgatgtctacgacggctatctaccgccgagcatccagggcagcgccgagaacgccgac
ttcgaccccttcctccaccagagccgcccccagaccctgcacgatcacctcatctggcag
ctcaacctcatccgactgagcgagcgcgacgagatgatcgccgaggcggtgatcgacgcc
atcgacgcgcgcggctatcttcgggccgatctcgacgagctgctggccaccatcggcgac
gatcagatcagtctcgaggagatcgccaccatggtgcaccgggtgcagtcgttcgatccc
ccgggggtcggcgcccgcgatctcgccgagtgcctgcagatccagctgcgtcagctcccc
gccgagaccccgcagcgcgacctcgcgctggcgatctgtcgcgacggcttcgagcacctg
ccgcgcaaggacatcgccgcgctgatgcgccgcttcaagcagaccgagcccgagattcgt
ggtgcactcacgctgatctgccagctcaacccgcaccccggcgacttgatcgcgcaggag
cccccggagtacgttgtacccgacatcttcgtgcgcagacagaatggtcgctggtcggtg
gaactcaacccggaatccacacccaaactgagggtgaacgcggactacgccagactgatc
cggcgcgccgacaccagcagcgacagcgtcaccatgcgcaaccacctgcaggaggcgcgc
tggttcatcaagagcctggcgagccgtaacgacaccgtgctgcgggtgggcgccaagatc
gtggagatgcagcaggcgttcttcgagcacggcgaggaggcgatgcggccgatggtgctg
cgcgacgtcgccgaggcgctcgagctgcacgagtcgaccgtctcccgggtcaccacgcag
aaatacatgcatacgccgaggggcaccctggagttcaagtacttcttctcgtcccacgtc
agcaccacttctggtggggagtgttcatcaacggcgatccgcgcgctcattcgtaagctg
atcgccgccgaacccgccagaaaacccttgagcgacagcaagatcgcggccgaactggcc
gatcgcggcatccaggtcgcgcgtcgaaccgtcgccaagtaccgcgaggccatgggtatt
ccagcctcgaacgagcgcaaacgcctggcatga
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