Marichromatium purpuratum: MARPU_01845
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Entry
MARPU_01845 CDS
T03650
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mpur
Marichromatium purpuratum
Pathway
mpur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARPU_01845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpur03019
]
MARPU_01845
Enzymes [BR:
mpur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARPU_01845
Messenger RNA biogenesis [BR:
mpur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARPU_01845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHF02737
UniProt:
W0DWC5
LinkDB
All DBs
Position
392032..393633
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AA seq
533 aa
AA seq
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MTDTHLSQTRLDSLALDPRILAGLAETGFTHCTPIQAETLPIALEGHDIAGQAQTGTGKT
AAFLLATMQRLLSHPTEPRDAADTVCRPRALILAPTRELAVQIHKDALVLGAHTGLRLGL
AYGGTGYQKQRDELAAGVDILIGTPGRLIDYFKQRVFDLRGIEVVVLDEADRMFDLGFIK
DIRFLLRRMPPPESRQGLLFSATLSYRVTELAYEHMNQPRLIKIETEQVTADRVRQCCYM
TANEEKIPLLIGLARGWLEGDARIIVFVNTKREADRVWGYLQGNGINTAVLSGDVPQKQR
LRLLREFTEGSLPVLVGTDVAARGLHIPDVTHVVNFDLPEDPEDYVHRVGRTARAGAAGD
AVGFVCETYAFCLPDIESFIDAKITVEPVDPSLLAEVDPGSRLRPERARRDGRRSGERGE
RGHGERDGRRRGARPRSTEPGAAGEGSTQDASSELSAQPPRPRRRRSTKVSDAPAACALT
DPAPDPAPQPPTETDAGQAEAPRKRRRRRRRKPSTSQETGVQSPKPEEIEPVD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacacacctctcccagacgcgcctcgactcgctggcgcttgatccgcggatc
ctcgcgggtctcgccgagaccggtttcacccactgtacaccgatccaggccgagaccctg
ccgatcgccctggaggggcatgacatcgccggtcaggcgcagactggcaccggcaagacc
gccgccttcctgctcgcgaccatgcagcggttgctcagccatcccaccgagccgcgcgac
gccgccgacaccgtctgtcgaccgcgggcgttgatcctcgccccgacccgcgagctggcg
gtacagatccacaaggacgcgctggtgctcggcgctcacaccggcttgcgtctggggttg
gcctatggcggcaccggctaccagaagcagcgcgatgagctggccgcgggcgtcgacatc
ctcatcggcaccccgggacggttgatcgactacttcaagcagcgggtgttcgacctgcgc
ggcatcgaagtggtggtgctcgacgaggccgatcgcatgttcgatctcggtttcatcaag
gacatccgcttcctgctgcgacggatgccgccgcccgagtcgcgccaggggctgctgttc
tcggccacgctctcctaccgggtcaccgagctggcctacgagcacatgaaccagccgcgt
ctgatcaagatcgagaccgagcaggtcaccgccgaccgggtgcgccagtgctgttacatg
accgccaacgaggagaagatcccgctgctgatcgggttggcgcgcggctggctcgagggc
gatgcgcggatcatcgtcttcgtcaacaccaagcgcgaggccgatcgcgtctggggctat
ctgcagggcaacggcatcaacaccgccgtgctctccggtgacgtcccgcagaaacagcgg
ttgcgcctgctgcgcgagttcaccgagggttcgctgccggtgctggtcggcaccgacgtg
gccgcacgcgggctgcacatccccgacgtcacccacgtggtcaacttcgacctgcccgag
gacccggaggactatgtccaccgcgtcgggcgcaccgcgcgtgccggtgctgcgggcgat
gccgtgggcttcgtctgcgagacctatgccttctgtctgcccgacatcgagtccttcatc
gacgccaagatcaccgtcgagccggttgatccgagcctgctcgccgaggtcgatcccggc
agccgcttgcgtcccgagcgcgcgcgtcgcgatgggcgccgttccggcgagcgtggtgag
cgcggccacggcgaacgcgacgggcgcagacgcggcgcgcgaccgagatccaccgagccg
ggcgcggcgggcgagggctcgacccaggacgcctcgagcgagttgtcggcgcagccgccg
cgcccgcgtcgacggcgttcgaccaaggtctcggacgccccggccgcctgtgccctcacc
gatcccgcccccgatcccgccccccagccgcccaccgagaccgatgccggtcaggccgag
gccccgcgcaagaggcgtcggcggcgtcgacgcaagccctcaaccagtcaggagacaggc
gttcagtcgcccaagcccgaggagatcgagccggtcgactga
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