Marichromatium purpuratum: MARPU_03860
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Entry
MARPU_03860 CDS
T03650
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mpur
Marichromatium purpuratum
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpur03009
]
MARPU_03860
Enzymes [BR:
mpur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARPU_03860
Ribosome biogenesis [BR:
mpur03009
]
Prokaryotic type
rRNA helicases
MARPU_03860
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AHF03107
UniProt:
W0DXB9
LinkDB
All DBs
Position
complement(829179..830540)
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AA seq
453 aa
AA seq
DB search
MNMHFSDYPLDPSLLRGLEQAGYEQPTPVQEAVLEPALDGRDLMVCAATGSGKTAAFLLP
MMQHMLETPKADGGTRALILVPTRELARQVREHFMRIGGHTRLGVDVITGGDSRAHQIAT
LRRNPEFLIATPGRFREMLEHGRTELDDLEFLVLDEADRMLEMGFVEDVVTIIENSNPDR
QSLLFSATLERRGLERITALLLDDPLALTLDAVREAHPDIRHQCLLSDEVAHKREQLRWL
LANETFEKALVFVNSRDLATELGGWLGAQGERVAVLHGELEQRERNRVMGLLQQGKVRVL
VATDLAARGIDVPGVERVFNLEVPRNGEDYLHRSGRTGRAGEQGVAVNLVGPTEWNRMES
ISRFLGLTLEWRAIDELAARFKGPAAKKRRKTPASRVKAKKTPARAASKTKDKQRHRDRK
NIGKRRAPSGKPIEAGHAPLSRKRRDEGGTEER
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcatttttccgactacccgctcgatccctcgctgctgcgcggcctcgagcag
gcaggctatgagcaaccgaccccggtccaggaggcggtgctcgagcccgcccttgatggt
cgcgacctgatggtctgcgccgccaccggctcgggcaagaccgccgccttcctgctgccg
atgatgcagcacatgctcgagacccccaaggccgacggcggcacccgcgcgctgatcctg
gtgccgacccgcgagctggcgcgtcaggtacgcgagcacttcatgcgcatcggcggtcac
acccgcctcggcgtcgacgtcatcaccggcggtgactcgcgcgcccaccagatcgccacc
ctgcgcaggaacccggagttcctgatcgccaccccgggacggttccgcgagatgctcgag
cacggtcgcaccgaactcgacgacctcgagttcctggtgctcgacgaggccgaccggatg
ctcgagatgggcttcgtcgaggacgtggtgaccatcatcgagaacagcaatcccgaccgt
cagtcgctgctgttctccgccaccctggagcggcgcggactggagcggatcaccgcactc
ctgctcgacgacccgctggcactgaccctggacgcggtgcgcgaggctcatcccgacatc
cgtcaccagtgcttgctcagcgacgaggtcgcgcacaagcgcgagcagctgcgctggctg
ctcgccaacgagaccttcgagaaggcactggtgttcgtcaacagccgcgacctggccacc
gagcttggcggctggctcggcgcccagggcgaacgggtcgccgtactccacggcgaactc
gagcagcgcgagcgcaaccgggtgatgggactgctccagcagggcaaggtacgggtgctg
gtcgccaccgacctggccgcacgcgggatcgacgtccccggggtggagcgggtgttcaat
ctcgaggtgccgcgcaacggcgaggactatctgcaccgcagcggacgcaccggacgcgcc
ggtgagcagggcgtcgccgtgaacctggtcgggccgaccgaatggaaccgcatggagagc
atcagccgcttcctcggcctcacgctcgagtggcgggcgatcgatgagctggcggcacgc
ttcaagggaccggcggcgaagaagcggcgcaagaccccggccagccgggtcaaggccaag
aagactccggcacgcgccgccagcaagaccaaggacaagcagcgccaccgtgatcgcaag
aacatcggcaagcgccgcgcaccctcgggcaagccgatcgaggccggtcatgccccactg
agtcgcaagcgtcgcgacgagggcgggaccgaggagcgctga
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