Marichromatium purpuratum: MARPU_08010
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Entry
MARPU_08010 CDS
T03650
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mpur
Marichromatium purpuratum
Pathway
mpur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARPU_08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpur03019
]
MARPU_08010
03016 Transfer RNA biogenesis [BR:
mpur03016
]
MARPU_08010
Enzymes [BR:
mpur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MARPU_08010
Messenger RNA biogenesis [BR:
mpur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MARPU_08010
Transfer RNA biogenesis [BR:
mpur03016
]
Prokaryotic type
tRNA degradation factors
MARPU_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
RNase_II_C_S1
KH_SLS1_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AHF03817
UniProt:
W0DZE1
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All DBs
Position
1743377..1745476
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AA seq
699 aa
AA seq
DB search
MIPTPIVKQFQFGNQTVRLETGEIARQADGAVLVNMEDTVVLVTVVVDKRAGVERDFFPL
TVDYQEKTYAAGRIPGGFFRREGRPSEAEILTARLIDRPLRPLFADGFKREVQIIATVKS
LNPAVNPEVPALIGASAAVALAGLPFNGPIGAARVGYKDGEYILNPPVVGLGPDSDLDLV
VAGTEQAVLMVESEARGLSEEVMLGAVLFGHEQLQVVIEAIRELVAEAGKPPFEWSAPER
DTALAAAVAEACGARIAEAYRIHDKKARYTALDTIRAETLATLCEGEDAAWSEQQVMGEI
EGLEKRTVRSAVIAGEPRIDGRDNATVRPITIRTGVLPRTHGSALFTRGETQAMVVTTLG
TERDSQIIDALDGERREHFMLHYNFPPFCVGESGRVGSPKRREIGHGRLAKRGVLAVMPS
IEEFPYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSPVAGVAMGLIKEDDQFAV
LTDIMGDEDHLGDMDFKVAGTIEGVNALQMDIKIEGITKEIMEIALEQAKAGRLHILEEM
NKVLSTPREEMSEHAPRIIEFKIHPEKIRDVIGKGGSVIRSITEETGATIDINDEGVVKI
FSVAKSAGEEAKKRIRLITADVEVGKVYEGKVARLMDFGAFVTILPGRDGLVHISQICEE
RVQSVSDKLSEGDVVRVKVLEVDKQGRIRLSMKAVELGE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgattcccacccctatcgttaaacagttccaattcggaaatcagaccgtcaggctcgag
accggcgagatcgcgcgccaggccgatggcgcagtcctggtgaacatggaagacaccgtg
gtcctggtgaccgtggtcgtggacaagcgcgccggtgtcgagcgcgacttcttcccgctc
accgtcgactaccaggagaagacctacgccgctggccgcatccccggtggcttcttccgt
cgcgagggtcgcccgagcgaggccgagatcctcaccgcccgtctgatcgaccgcccgctg
cggccgctgtttgccgatggattcaagcgtgaggtgcagatcatcgcgacggtcaagtcg
ctcaaccccgcggtcaatcccgaggtgccggcgctgatcggtgcttctgcggcggtggcc
ctggccggtctgcccttcaacggcccgatcggtgctgcccgggtcggctacaaggacggt
gaatacatcctcaaccccccggtggtcggtctcggaccggactccgacctcgacctggtg
gtcgccggcaccgagcaggcggtgctgatggtcgagtccgaggcccgtggtctctccgaa
gaggtgatgctcggtgccgtgctgttcggtcacgagcagctgcaggtggtcatcgaagcg
atccgtgagcttgtcgccgaggccggcaagccgcccttcgagtggagcgccccggagcgc
gacaccgcgctcgccgccgccgtcgccgaggcctgtggcgcgcgcatcgccgaggcctat
cgcatccacgacaagaaggcgcgttacaccgcgctcgacaccatccgtgccgagaccctg
gccacgctttgcgagggcgaggacgcggcctggagcgagcagcaggtgatgggtgagatc
gagggcctggagaagcgtaccgtgcgttcggcggtgatcgccggcgagccgcgtatcgac
ggtcgcgacaatgccaccgtgcgcccgatcaccatccgtaccggcgtgctgccgcgcacc
cacggctcggccctgttcactcgtggcgagacccaggcgatggtggtcaccaccctgggc
accgagcgtgactcgcagatcatcgacgcactcgatggcgagcggcgcgagcacttcatg
ctccactacaacttcccgcccttctgcgtcggtgagtcgggtcgcgtcggcagccccaag
cgccgcgagatcggtcacggccgtctggccaagcgcggcgtgctggcggtgatgccgagc
attgaggagttcccctactcggtgcgcgtggtctccgagatcaccgagtcgaacggttcg
agttcgatggccagcgtttgcggcaccagcctcgcgctgatggatgccggcgtgccgatc
aagtccccggtagccggtgtcgccatgggcctgatcaaggaagatgatcagttcgcggta
ctcaccgacatcatgggcgacgaggaccacctcggcgacatggacttcaaggtggccggt
accatcgagggcgtcaatgccctgcagatggacatcaagatcgagggcatcaccaaggag
atcatggagatcgccctggagcaggccaaggccgggcgtctgcacatcctcgaggagatg
aacaaggtgctgtcgacgccgcgcgaggagatgtccgagcacgcgccgcgcatcatcgag
ttcaagatccaccccgagaagatccgcgacgtcatcggcaagggcggttcggtgatccgc
tcgatcaccgaggagaccggcgccaccatcgacatcaacgacgaaggcgtggtgaagatc
ttctcggtggccaagtccgccggtgaggaggcgaagaagcgcatccgtctgattaccgcc
gatgtcgaggtcggcaaggtctacgagggcaaggtcgcacggctgatggacttcggtgcc
ttcgtcaccatcctgcccggtcgcgacggtctggtgcacatctcgcagatctgcgaggag
cgggtgcagagcgtcagcgacaagctctccgagggcgacgtggtgcgcgtcaaggtgctc
gaggtcgacaagcagggtcggatccgtctgagcatgaaggcggtcgagctcggcgagtga
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