Marichromatium purpuratum: MARPU_08220
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Entry
MARPU_08220 CDS
T03650
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mpur
Marichromatium purpuratum
Pathway
mpur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MARPU_08220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpur03400
]
MARPU_08220
Enzymes [BR:
mpur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MARPU_08220
DNA repair and recombination proteins [BR:
mpur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MARPU_08220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
AAA_16
AAA_28
TPR_15
SLFN-g3_helicase
Phageshock_PspD
UvrD_C
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AHF03856
UniProt:
W0E455
LinkDB
All DBs
Position
complement(1794331..1796361)
Genome browser
AA seq
676 aa
AA seq
DB search
MNETARTLFDELALWVEQGVLRALDLALARFVQREAAEQDPAVLLAVALVSERNGHGHVC
LDLGDALAHPETLLASDTERPPEPGVHDALTARLAGLDPAAWAARLGASSAVCDLANSGD
DGCAPLVLAGTPRRPLLYLRRYWRYERIIEQGIAQRLARPQPLDPARLRPLLADLFPAEH
GDPWQQIACVLAARSPFAVITGGPGTGKTTTVVRLLALLQGLALAADRAPLRIRLAAPTG
KAAARLNASIAPRVADLPVAESLRATIPTAVSTLHRLLGPIPDSRAFRHHARNPLDADLV
VVDEASMVDVELMAALIEALRPETALVLLGDKDQLASVEAGAVLGDLCRRASAGHYTEAT
ATWVGAACGQSLPPETLDDAGTPLDQAIAMLRHSYRFRAEGGIGALAQRINTEPAPTRAE
VQALFGAPQQEALGVIAELAVRTPDDPALINLVVSGYRGYLRRMREQAPTAAADNTEIDD
WARAVLAAHGEFQLLAALRHGPWGVAGLNARIGDWLTRAGLLDGTDHAWFAGRPVLITRN
DYGLRLMNGDIGIALETPLRDADGGHRRVLRVAFPHPDGDDAIRWVLPSRLQAVETVFAM
TVHKSQGSEFTHTALALPDHPTPVLTRELIYTGITRARERFTLIHQHPRVLEAALRRRVR
RVSGLRLGTNDEEQRS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagacggcccggacgctcttcgacgagctggccctgtgggtcgagcagggtgta
ctgcgcgcgctcgatctcgcactcgcccgcttcgtccaacgcgaggccgccgagcaggac
ccggcggtgctgctcgccgtcgccctggtcagcgagcgcaatggtcacggccatgtctgt
ctcgacctcggcgatgcgctcgcccaccccgagaccctgctcgccagcgacaccgagcgc
ccgcccgaacccggcgtccacgacgcgctcaccgcccgactcgccggactcgaccccgcc
gcctgggcggcacgactcggcgccagcagcgcagtctgcgatctcgccaacagcggcgac
gacggctgcgcgccactggtgctcgccggcacgccccgccgcccactgctctatctgcgc
cgctactggcgctacgagcggatcatcgaacagggcatcgcgcagcgtctggcgcgcccc
cagcctctcgacccggcacggctgcgcccgctgctcgccgatctcttccccgccgagcat
ggcgatccctggcagcagatcgcctgcgtgctcgccgcgcgcagtcccttcgcggtgatc
accggcggtcccggcaccggcaagaccaccaccgtggtgcgtctgctcgcactgctccag
gggctcgcgctcgccgccgaccgggcgccgctgcgcatccgtctggccgcgcccaccggc
aaggccgccgcccgactcaatgcctcgatcgcccctcgggtggccgatctgccggtggcc
gaatcgctgcgtgcgaccatccccaccgcggtctcgaccctgcaccggctgctcggcccg
atccccgacagtcgcgccttccgccaccacgcccgcaacccgctcgatgccgacctggtg
gtggtcgacgaggcatcgatggtcgatgtcgagctgatggccgcgctgatcgaggcgctg
cgccccgagaccgcgctggtgctgctcggcgacaaggaccagctcgcctcggtcgaggcc
ggggcggtgctcggcgatctctgccgccgcgccagcgccggacactacaccgaggcgacc
gccacctgggtcggcgccgcctgtggtcagtcactcccgcccgagaccctcgacgatgcc
ggcacgccgctcgaccaggccatcgccatgctcagacacagctatcgcttccgcgccgag
ggcgggatcggcgcgctggcccaacgcatcaacaccgagcccgcgcccacccgcgccgag
gtccaggcgctcttcggcgcaccccagcaagaagcgctcggggtgatcgccgagctggcg
gtccggacccccgacgatcccgcgctgatcaacctggtggtctccggctaccgcggctat
ctccgccggatgcgtgagcaggccccgaccgcggctgccgacaacaccgagatcgacgac
tgggcacgcgccgtgctcgccgcccacggcgagttccagctcctcgccgcgctgcgccac
ggtccctggggcgtggccggactcaacgccaggatcggcgactggctcacccgcgccggg
ctgctcgacggcaccgatcacgcctggttcgccgggcgaccggtgctgatcactcgcaac
gactacgggctgcgactgatgaacggcgacatcggcatcgctctggagacgccgctgcgt
gacgccgatggcggacaccgtcgggtgctgcgcgtcgccttcccgcaccccgacggcgac
gacgccatccgctgggtgttgccgagccggttgcaggcggtggagacggtgtttgcaatg
acggtgcacaagtcccagggctcggagttcacccataccgcactcgccctgcccgatcac
cccaccccggtgctcacccgcgagctgatctataccggcatcacccgtgcccgcgagcgc
ttcaccctgatccatcagcacccccgggtgctcgaggccgcgctgcgtcgccgcgtcagg
cgcgtcagcggactgcggctgggtaccaacgacgaggagcagagatcatga
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