Marichromatium purpuratum: MARPU_08230
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Entry
MARPU_08230 CDS
T03650
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mpur
Marichromatium purpuratum
Pathway
mpur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MARPU_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpur03400
]
MARPU_08230
Enzymes [BR:
mpur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MARPU_08230
DNA repair and recombination proteins [BR:
mpur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MARPU_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHF03858
UniProt:
W0E2X1
LinkDB
All DBs
Position
complement(1800073..1803564)
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AA seq
1163 aa
AA seq
DB search
MTRSGDWPTGFMLIQGNRLESLRDLLTTWVARYPLHPLEDEVVLVQSNGIAQWIKLALAE
PSGGELGGGCGISAALRVMLPGRFVWEAYRGVLGALPPSSPYDKAPLTWRIHRLLGELLQ
RPADPVLAPLHAFMHGEERARRRHQLAERLADLFDQYQVYRADWLEAWGRGKDVLIRADG
AQQPVPEDQRWQPLLWRLLHQDLAGTTTDDPLDQASRAEIHRRFLATVEDAAMARLPRRV
IVFGISSLPRQTLEVLEGIAAHSQVMLFVHNPSRHYWGDIIEGRALFARAYGRNHARKVP
EDVDETALHLHGHPLLAAWGRQGRDYIRLLDEHDRREHYEGVFRQQSLDIDLFESATEHH
LLAQLQDDILELRPLGERQQQNTAIDPTDDHSLGFTIAHSAQREVEILHDQLLAAFVTAE
AEGRPLAPREILVMVPDIDLYAPHIAAVFGRIPRRDPRHLPFHIADQGERHRNPLLIGLT
TLLDLPRARFTVTELLDLLDIAALRARFGLTEGELPRLRSWIIGANVRWGLDGRQREHLG
LPAAAERNTWRFGLRRMLLGFAAGATGAWRGIEPHAEVGGLEATLLGPLIDLLETLERYW
ERLDQPRTPGDWVTTIEQLLEDCFSPCGESDELALARVRETLEQWDEDCRQADAGAEPLP
LEVLRDTLLRGLDAPSLTQRFLGGAINFATLMPMRAIPFRQIWLLGMNDGDYPRNHRPPD
FDLMADDYRPGDRSRREDDRYLFLEALLSARERLSISWIGRDIRDNTPKTPSVLVGQLRD
HLAAGWRCANPDGDGQTLLAALTTEHPLQPFSRAYFRPGRDPRLFTYASEWRAIHDTPGT
DDDSDLPPWSPEGPLDLRRLAQFLRAPVDALFRQRLQVDRPRASERPADVETFALDGLLN
WQLSEQLITELFDPADVELALAPRLEAALERLQARGELPAGAQGELLAASIGERLLPLHQ
RWQTLRREYPRDLGHPSPLSLEHRTDGDVALRLEDQLAPRLGAEHQDTRIQLRLSASSIV
KDKHYRWHQIVEHWLHHLAAQLTGEPVATWVLTPAGRLHLRPLDPELSRTRLQRLLAAWW
AGMRAPLPATLETGIAWLGRRDDAPDLEPSFTAALEHSGYLARCYPDASSLQQHPEFTDW
AERLYTDLHTDIKNPDQATWDDS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagatctggggactggcccaccgggttcatgctgatccagggcaaccggctggag
tcactgcgcgacctgctgaccacctgggtggcacgctacccactccacccgctcgaggac
gaggtggtactggtgcagagcaacggcatcgcccagtggatcaaactcgccctcgccgaa
ccgtcggggggcgaactcggtggcggctgcggcatctccgccgcgctgcgggtgatgctg
ccgggacgcttcgtctgggaagcctaccgcggtgtgctcggcgcattgccgccaagctcc
ccctatgacaaggcgccactcacctggcgcatccatcgtctgctcggcgagctgctgcaa
cgccccgccgatccggtgctcgcgcccctacacgccttcatgcacggcgaggagcgcgca
cgccgacgccatcaactcgcagaacgactcgccgacctcttcgaccagtaccaggtctat
cgcgccgactggctcgaggcctggggacgcggcaaggacgtcctgatccgcgccgacggc
gcacaacagcccgtgcccgaggaccagcgctggcaaccgctgctgtggcgactgctccac
caggacctcgccgggacgaccaccgacgacccgctcgaccaggccagccgcgccgagatc
caccgtcgcttcctcgccacggtcgaggacgccgccatggcccggctgccgcggcgggtg
atcgtcttcggcatctcctcgctaccgcgccagaccctcgaggtactcgagggcatcgcc
gcccacagtcaggtgatgctcttcgtccacaatcccagccgacactactggggcgacatc
atcgagggtcgcgcactcttcgcccgcgcctatggacgcaaccacgcgcgcaaggtcccc
gaggacgtcgacgagaccgccctccatctccacggtcacccactgcttgccgcctggggt
cgacaggggcgcgactacatccgtctgctcgacgagcacgaccggcgcgagcactatgaa
ggcgtgttccgccagcagtcgctcgacatcgacctgttcgagtccgccaccgagcaccat
ctgctcgcccagctccaggacgatatcctcgagctgcgaccgctcggcgagcgccagcag
cagaacacggcgatcgatcccaccgacgaccacagcctgggcttcaccatcgcccacagc
gcccagcgtgaggtcgagatcctccacgaccagctgctcgccgccttcgtcaccgccgag
gccgagggccgcccactcgccccgcgcgagatcctggtgatggtccccgacatcgatctc
tatgcgccgcacatcgctgcggtgttcggccgcatcccgcgccgggatccgcgccatctg
cccttccacatcgccgaccagggcgagcgccaccgcaatccgctgctgatcgggctcacc
acgctgctcgacctgccgcgagcgcgcttcaccgtcaccgagttgctcgatctgctcgac
atcgccgcgctgcgcgcgcgcttcggtctcaccgagggcgagctgccccggctgcgcagc
tggatcatcggcgccaacgtgcgctggggactcgacgggcgccagcgcgaacacctcgga
ctgcccgccgcggccgagcgcaacacctggcgcttcgggctgcggcggatgctgctcggc
ttcgccgccggcgcgaccggtgcctggcgcgggatcgagccgcacgccgaggtcggcggc
ctggaggcgacactgctcggcccgctgatcgatctcctggagaccctggagcgttactgg
gaacgactcgaccagccgcgcaccccgggcgactgggtcacgaccatcgagcaactgctc
gaggattgtttcagcccctgcggcgagagcgacgagctggccctggcgcgcgtacgcgag
accctcgagcaatgggacgaggactgtcgtcaggccgacgccggcgccgagcccctgccg
ctggaggtgctgcgcgacaccctgctgcgcgggctcgacgcacccagcctcacccagcgc
tttctcggcggcgcgatcaacttcgccacgctgatgccgatgcgcgccatccccttccgc
cagatctggctgctggggatgaacgacggcgactatccgcgcaaccatcgcccccccgac
ttcgacctgatggccgacgactaccgcccgggcgatcgctcgcgccgcgaggacgaccgc
tatctcttcctcgaggcgttgctctcggcgcgagaacggctgtcgatcagctggatcggg
cgcgacatccgcgacaacacccccaagacgccctcggtgctggtcggtcagctgcgcgac
catctcgccgccggttggcgctgcgccaaccccgacggcgacggtcagacgctactcgcc
gcgctgaccaccgagcacccgctgcagcccttcagtcgcgcctacttccgccccgggcgc
gacccccggctgttcacctatgccagcgaatggcgcgcaatccacgacacacccggcacc
gacgacgacagcgatctccccccctggagcccggaaggaccgctcgacctgcgtcgactc
gcccagttcctccgcgccccggtcgatgcgctgttccgtcagcgtctccaggtcgaccgc
ccgcgcgccagcgagcgcccggccgatgtcgagaccttcgccctcgacggcctgctcaac
tggcagctcagcgagcagctgatcaccgagctgttcgatcccgccgacgtcgaactcgca
ctcgccccccggctggaggccgcgctcgaacggctgcaggcccgtggcgaactgcccgcg
ggcgcccagggtgagctgctcgccgccagcatcggcgagcgactgctgccgctgcaccag
cgctggcagacactgcgtcgcgagtatccgcgcgatctcgggcacccctcaccgctcagc
ctcgaacaccgcaccgacggcgatgtggcgctgcggctcgaggaccagctcgccccccgg
ctcggcgccgagcaccaggacacacgcatccagctccggctcagcgccagcagcatcgtc
aaggacaagcactaccgctggcaccagatcgtcgagcattggttgcaccatctcgccgcc
cagctcaccggtgagccggtcgccacctgggtgctcaccccggcgggtcggctgcacctg
cgcccgctcgatcccgaactctcgcgtacccgtctccaacgactgctcgcggcctggtgg
gcggggatgcgcgcgccgctgccagcgaccctggagaccggcatcgcctggctcggacgc
cgcgacgacgccccggacctcgaaccgtccttcaccgcggccctggagcacagcggttat
ctcgctcgctgctaccccgacgcctcaagcctccagcaacaccccgagttcaccgactgg
gccgagcggctctataccgacctgcacaccgacatcaagaaccccgaccaggccacctgg
gatgacagctga
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