Marichromatium purpuratum: MARPU_14020
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Entry
MARPU_14020 CDS
T03650
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mpur
Marichromatium purpuratum
Pathway
mpur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARPU_14020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpur03019
]
MARPU_14020
Enzymes [BR:
mpur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARPU_14020
Messenger RNA biogenesis [BR:
mpur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARPU_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UTP25_NTPase-like
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AHF04844
UniProt:
W0E6K9
LinkDB
All DBs
Position
complement(3169769..3171097)
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AA seq
442 aa
AA seq
DB search
MSFDSLGLRADLLRAVAGQGYARPTPIQEQAIPAVLAGHDLLAGAQTGTGKTAAFALPVL
QLLAARKSNGGRRLPRALVLSPTRELAAQIGERFQAYGREVSLRSTVIFGGVGMQPQVDR
LRRGVDILVATPGRLLDHAARRTLDLSAVEILVLDEADRMLDMGFIHDIRKVLALLPKQR
QNLLFSATYSDEIRRLADGILHQPKLVEVARRNTAAETVEQGAHPVDKSRKRELLAHLFH
REGWDQALVFTRTKAGANRLAEYLGREGIAAAAIHGNKSQSARTRALSEFKQGRVRALVA
TDIAARGIDIANLPQVVNFELPAVAEDYVHRIGRTGRAGAGGRALSLVSHDERKLLNGIQ
RLIKREIVLQPVAGFEPSAEAPTNETPDHGRGGRHRRSGGRNGGRGNGGNAQRERSGRPA
PKSRSGQGAKRARLGQGGSTRA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgattcgctcggcctgcgggccgatctgctgcgtgccgtggcaggtcagggc
tatgcacgcccgaccccgatccaagagcaggccatccccgcggtcctggccggccatgat
ctgctcgccggcgctcagaccggcaccggcaagacggcggccttcgcgcttcccgtgctg
cagctgctcgcggcccgcaagagcaatggtggacgacgtctgccccgcgcgctggtgctg
tcgccaactcgcgaactggcggcacagatcggcgagcgcttccaggcctatggtcgcgag
gtgtcgctgcgctcgacggtgatcttcggtggtgtcggcatgcagccgcaggtcgaccga
ctgcggcgcggcgtggacatcctggtggctacgccggggcggctgctcgatcatgccgcg
cgccgcaccctggacctgtccgcggtcgagatcctggtcctcgacgaggccgatcggatg
ctcgacatgggcttcatccacgatatccgcaaggtgctcgcgctgctgcccaagcaacgt
cagaatctgctgttctcggcgacctattccgacgagatccgccgcctggcagacggtatc
ctccaccagcccaagctggtcgaggtcgcccggcgcaacaccgccgccgagaccgtggag
cagggtgcgcacccggtcgacaagtcgcgcaagcgcgagctgttggcgcacctcttccac
cgtgaaggttgggaccaggcgctggtgttcacccggaccaaggccggcgccaaccgcctg
gccgagtatctggggcgtgaggggattgccgcggcggcgatccacggcaacaagagccag
tcggcgcggacccgtgcactgagcgagttcaagcaggggcgggtgcgggcgctggtggcc
accgacatcgccgcgcgcggcatcgacatcgccaatctaccccaggtggtgaacttcgaa
ctgcccgccgttgccgaagactacgtccaccgcatcgggcgcaccggtcgcgctggtgcc
ggtggtcgggcgttgtcgctggtcagtcatgacgagcgcaagctgctcaatggcatccag
cgcttgatcaagcgtgagatcgtgctccaaccggtagccggtttcgagccctcggccgag
gcgccgacgaatgagacccccgaccatggtcggggtggtcgtcaccgtcgttcgggcggt
cgcaatggcggccggggcaacggcggcaatgcacagcgggagcgctccgggcgtcccgcg
cccaagtcgcggtcgggtcagggcgccaagcgcgcccggctcggtcagggcggctcgaca
cgggcctga
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