Myroides profundi: MPR_0316
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Entry
MPR_0316 CDS
T03631
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mpw
Myroides profundi
Pathway
mpw03030
DNA replication
mpw03430
Mismatch repair
mpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPR_0316
03430 Mismatch repair
MPR_0316
03440 Homologous recombination
MPR_0316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpw03032
]
MPR_0316
03400 DNA repair and recombination proteins [BR:
mpw03400
]
MPR_0316
Enzymes [BR:
mpw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPR_0316
DNA replication proteins [BR:
mpw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPR_0316
DNA repair and recombination proteins [BR:
mpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPR_0316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
FBF1
CUSTOS
Motif
Other DBs
NCBI-ProteinID:
AJH13533
UniProt:
A0AAJ5BCF3
LinkDB
All DBs
Position
347603..352129
Genome browser
AA seq
1508 aa
AA seq
DB search
MYLIFDTETTGLPKSWQAPITDTDNWPRCIQIAWQLHDEYGKLIEHQDYLIKPEGFNIPY
DAERIHGISTELAEQDGISLMEALEKFNIALSKTKFIVGQNAGFDVNIMGCEFYRKGVNS
IMSELPVLDTCTEVTAEMLKLPGGRGGRYKLPTLTELHTFLFGEKFAEAHNATADVEATT
RCFLELIKHGTFSTQELQQDEEYIVRYREANPQPFQLIGLKHINLKKASEEIRKRLAKLE
GGASEEVSDHEKELLDQANFAHLHVHTQFSILQSTIAINNLVKKAGDCDMSAVAMTDHGN
MMGAFHFVMAVNNHNKGIEAKNKERAENGEEPLQTLTPIVGCEFFICENHTDKTKKDNGY
QVVLLAKNKKGYHNLAKMASIAYTDGFYYVPRIDKQVVEQYKEDVMVLTGNLYGEVPGKI
LNVGERQAEEALIWWKEQFGDDLYVELMRHNQEDENRVNKALVELARKHDVKLIATNNAY
YLDKKDANAHDILLCVKDGEKQSTPIGRGRGYRYGLPNQEYYFKSTEEMKELFSDLPDAI
YNIQEVVDKVEPFVLHRDVLLPKFDIPEEFQDARDLEGDGSGKRGENNFLKHLTYKGAEA
RYPEVTEEIRERLDFELATIERTGYPGYFLIVQDFIAAAREMGVSVGPGRGSAAGSAVAY
CLGITNLDPIEYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGANQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPSKWNLNRFLTEDENAIKGVLRSEE
FDKVKELIALAQEGSLAAETIQQAKILEGSMRNTGIHACGVIITPDDITKFVPVTLAKDS
DLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTIKLVKYRTGIDIDPDKIPIDDVKTYE
LFQRGETIGVFQYESAGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIRRKNGEEP
IVYDLDACEEYLQETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQKDVLDKMKP
KFVEQASAKGHDATTLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAA
VLSNNMNDIKSVTFFMEECKRMGLQVLGPDVNESFYKFTVNDNYEIRFGMGAIKGVGQGA
VNTIVENRKDGLYTSVFDLAKRIDLRSANKKAFENLALAGGFDCFKNTHRAQYFHTDPSD
NIVFLEKAIRYGAKSQENDNSSQFSLFGESSEVQIPEPLLPICEEWSTMEKLAKEKEVVG
IYISGHPLDDFKFEMRYFCNVKVEELTDLNPFTGRNLMFGGMISDVQFRTSAKGKDWALF
TIEGYDESFEFRMFNEEFLKFRHFLLNNTFVYIKILVKEGWVNKDTGEKSEPRIQFVEMK
LLHEVIPTYAKKLTVVMNVKDVATRQAELIKDAFSRYQGDSFVNFEVLEVERIAKETTTV
VALQLRMNEGDEDDVTGEGFEMDEPIAVDVPEFRVVNRLEFTSRNSRVNITAELLEELEA
LQVDFKLN
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgataccgaaactacagggcttcctaaaagttggcaggcgcccatt
accgatactgataactggcctcgatgtatacagatcgcttggcagttacacgatgagtat
ggtaagctgatagagcatcaagattatctgattaagccagaaggatttaatattccttat
gatgcagagcgcatacatggtatctcaacagaattagcagaacaagacggtatctctcta
atggaagcattggagaagtttaatattgcgctgtctaagactaagtttatcgtcggtcag
aatgctggttttgacgtgaatattatgggatgtgagttttatcgtaagggagtgaatagt
attatgtcagagttacctgtactagatacctgtacagaggtgacggctgagatgctgaag
ctacctggaggtagaggaggtagatataagcttcctacactgacagagctacatacattc
ttgtttggagagaagttcgcggaggcacataatgctactgccgatgtggaggcgactact
cgatgtttcttggaattgatcaagcacgggacattctctacgcaggagttacaacaggat
gaggagtatatcgtgcgttaccgcgaggctaaccctcagccatttcagctgataggtctt
aaacatatcaacttaaagaaagcatctgaagagatccgcaagcgactggctaaattagaa
ggtggagcatctgaggaagtgtcagatcatgagaaagaattattagatcaggctaacttc
gcacacttacacgtccatacacagttctctatcttacagtctacgatagcaattaataat
ctagtgaagaaggctggtgactgtgatatgtctgctgtagcgatgacggatcacggtaat
atgatgggggcattccacttcgtgatggctgtgaataaccataataaggggatagaggct
aagaataaagagcgagctgagaatggggaagaaccattacagacgttaactcctatcgtg
ggatgtgagttctttatctgcgagaatcatacggataagactaaaaaagacaatggatat
caagtagtattacttgctaaaaataaaaaggggtatcacaatctagcgaagatggcttct
atcgcttatacagatgggttctactatgtgcctcgtatcgataagcaggtggtagagcag
tataaagaagatgtgatggtactgacaggtaacttatatggtgaggtacccggtaagata
ttaaatgtaggtgaacgccaagctgaagaagccctaatatggtggaaagagcagttcggc
gatgatctatacgtagagttgatgcgacataatcaagaagatgagaatcgcgtgaacaag
gcattagtggagctagcgcgtaaacacgatgtgaagctgatagcgactaataatgcttat
tatttagataaaaaagatgcgaatgcacacgacattctattgtgtgtgaaggatggtgag
aagcagtctactcctatcggtagaggtagaggctatagatatggtcttcctaatcaggaa
tactactttaagtctactgaggagatgaaggagctgttctcagacttacctgatgccatc
tataatatacaagaggtagtggataaggtggagccattcgtgctacatcgagatgtatta
ctacctaagttcgatataccagaggagttccaagatgcgcgagatttagaaggagatgga
agtggtaaacgtggagagaataacttcttaaagcaccttacttataaaggagcagaagct
aggtatcctgaggtgacagaggagatccgagagcgactagacttcgaactagcgactatc
gagagaacagggtatcctggttatttcttgattgtacaagactttatcgcagcagcgaga
gagatgggagtgtctgtaggtcctggtcgtggttcggctgcgggttcggctgtggcgtac
tgtctaggaattacgaatctagatcctatcgagtatgatttgctttttgagcgtttcctt
aaccctgaccgtgtatcgatgcccgatattgatattgacttcgatgatgaaggtcgtggt
cgtgtaatggattatgtaatcaataagtatggagctaatcaggtagcgcagattatcacg
tatggtaagatggcgactaagtctgcgattagagatacggctagggtattagacttgccg
ttattcgaggcagatagaatcgcgaagcttatccctggtatgatgccatctaagtggaat
ctaaatcgattcttaacagaggatgagaacgctataaaaggagtacttcgatcagaagaa
tttgataaagtaaaagaattaatagccttagctcaagagggatcattagctgcagagact
atacagcaagctaagatactagagggatcaatgcgtaatacaggtattcacgcttgtggg
gtaattattactcctgatgatattacgaagttcgttccagtaactctagctaaagactca
gacttatatgtaacacagtttgacaactcggtagcagagagtgcaggtctactaaagatg
gacttcttagggttaaaaacattaacccttattaaggacacgattaagttagtgaagtat
cgtacgggtatagatatagatccggataagatacctatcgatgatgtgaagacatacgag
ctgttccagagaggtgagactatcggggtgtttcagtacgagtctgcaggtatgcagaag
tatatgcgtgaactgaagcctactgtatttgccgatctgatagcgatgaatgcgctgtat
cgtccagggccactagagtatatcccttcgtttattcgtcgtaagaatggggaagagcct
attgtatatgacttagatgcatgtgaagaatacttacaagagacgtacggtattacggta
tatcaagagcaggtgatgcttctgtcgcagaagttggcaggatttactaaaggtgaggcc
gatgtactgcgtaaggcgatgggtaagaagcagaaagatgtactagataagatgaagcca
aagttcgtagagcaggcttctgctaaaggacatgatgcgactacactagagaagatatgg
aaagactgggaagcgtttgcttcttatgcgtttaacaagtctcactcgacctgttatgca
tggatagcgtatcagacagcgtatctgaaggcacactatccagcagagtatatggcagct
gtactgtctaataatatgaatgatatcaagtcagtcaccttcttcatggaagagtgtaag
cgcatgggactacaagtattagggcctgatgtgaatgagtcattctacaagtttacagta
aatgataactatgagattcgcttcggtatgggggcaatcaagggagtaggtcaaggggca
gtaaatactatcgtagagaatagaaaagatgggttatacacttctgtattcgatctagca
aagagaatagatctgagatcagcaaataagaaagcgttcgagaaccttgctttagcaggt
ggttttgactgttttaaaaatacacatagagcacagtacttccacacagacccaagtgat
aatatagtattcttagagaaagctatacgctatggggctaagtcgcaggagaatgacaac
tcttctcagtttagtttattcggtgagagtagtgaagtacaaatacctgagcctctatta
cctatctgtgaggaatggagtacgatggagaaattagctaaggagaaagaggtagttggt
atctatatctcaggacatccattagatgactttaagtttgagatgagatacttctgtaat
gtgaaggtagaggagttgacagatttaaatcctttcacagggcgcaacctgatgtttgga
ggaatgattagcgatgtacagttccgtacttctgctaaagggaaagattgggctctgttt
accatagaagggtatgatgagagctttgagttcagaatgttcaatgaggagttcttgaag
tttagacatttcttattaaacaatacattcgtatatattaagatcctagtcaaagaaggt
tgggtaaataaagatacaggagagaagagcgagcctcgcattcagtttgtagaaatgaag
ttactacatgaagtaatccctacttatgctaagaagcttactgtagtgatgaacgtaaaa
gatgtggctactaggcaagcagagttaatcaaagatgcttttagtagatatcaaggggat
agctttgtaaacttcgaggtactcgaggtagaacgaatcgcaaaagagactactactgta
gtagcactacagctaaggatgaatgaaggagatgaagatgatgtaacaggtgaaggcttt
gaaatggatgagcctatagcggtagatgtaccagagttcagagtagtgaatagattagag
tttactagtcgtaatagtagagtgaatatcacagcagaattactagaagaactggaagcc
ttacaagtagattttaaattaaactag
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