Myroides profundi: MPR_0760
Help
Entry
MPR_0760 CDS
T03631
Name
(GenBank) tRNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mpw
Myroides profundi
Brite
KEGG Orthology (KO) [BR:
mpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpw03016
]
MPR_0760
Enzymes [BR:
mpw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MPR_0760
Transfer RNA biogenesis [BR:
mpw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MPR_0760
Prokaryotic type
tRNA splicing ligases
MPR_0760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AJH13955
UniProt:
A0AAJ5BDB6
LinkDB
All DBs
Position
complement(831587..832978)
Genome browser
AA seq
463 aa
AA seq
DB search
MGRKLSGRDFIKIGFPQNNTINIALGQVNRYKKKENKNNILEEAKLVLKNPDSYIGDGIW
GKVAESMIKQVEVKKHQLNTNRVPFSIYGEDAIDEQTKYQLFTALKLPVAIQGALMPDAH
YGYGLPIGGVLATDNAVIPYGVGVDIGCRMSMSVFNLPASFLKGKDHMLLNILSEHTKFG
MYDTHKVKADHEVFSREEFKNIPFVKGLLDKAYKQLGTSGSGNHFVEFGIVRLTETKPEW
RLEPGEYIAVLSHSGSRGLGANIAKHYTYLATKQCPLPSNAQHLAWLDLNTHDGQEYWLA
MNLAGDYAKACHDDIHRRIAKALGKQIAFTIENHHNFAWKEVINNKELIVHRKGATPAAE
GQLGIIPGSMTTNGYIVEGLGNAESLNSASHGAGRLHSRTTCKQKFTKSEIKKELSSTGV
QLIGGSVDEAPMAYKDINAVMQAQSELVKVLGSFTPKFVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaactttctgggagagactttattaaaataggctttcctcaaaataataca
ataaacatcgccttagggcaagtaaatagatataagaaaaaagaaaacaaaaacaacata
cttgaagaagctaagcttgtactaaagaaccctgattcttacataggagacggtatctgg
ggcaaagtagcagagagtatgataaagcaagtagaagtcaaaaagcatcaactgaatacc
aatagagttccattctctatctatggagaagacgctatagacgaacagacgaagtaccaa
ctgttcactgctttaaaattacctgtagcaatacagggggcattaatgcctgacgctcat
tacggttatggattacctatcggaggagtattagctactgataatgctgttattccttat
ggagtaggtgtagatataggatgccgtatgagtatgtcagtctttaatctacctgccagc
ttcctaaaagggaaagaccatatgttgttaaacatattatcagaacatactaagttcggg
atgtatgacacacataaagtcaaagctgatcatgaagtattcagtagagaggaatttaaa
aacattccttttgtaaaaggtttattagataaagcgtataaacaattaggaacatcaggt
agtggtaaccacttcgtagagtttggaatcgttagattaacggagactaaacccgagtgg
agattagaacctggagaatatatcgcagttctttcacatagtggatcaagaggtcttgga
gctaatatcgctaagcactatacatatttagcaactaaacaatgccctctaccaagcaat
gcacaacatttagcttggttagacctcaacacacatgatgggcaagagtattggttagcc
atgaatcttgcaggagattatgcgaaggcatgccacgatgatatacaccgtcgcattgcg
aaagcattaggtaagcagatagctttcactatcgaaaaccatcataacttcgcttggaaa
gaagtgattaataacaaagaattaattgttcaccgcaaaggagctactcctgctgcagaa
ggacaattaggaataatcccaggatcgatgactactaatggctatatagtcgaaggtctg
ggaaatgcagagagcttaaattctgcctctcatggagcaggacgcctacactcacgcaca
acatgtaaacagaagtttaccaagagtgagattaagaaagagcttagctctacaggtgtt
caacttataggaggtagcgtagatgaagccccaatggcttataaagacatcaatgcagtg
atgcaagctcaaagcgaattagtaaaagtattgggaagctttacccctaaatttgtaaga
atggataagtaa
DBGET
integrated database retrieval system
