Myroides profundi: MPR_2212
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Entry
MPR_2212 CDS
T03631
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mpw
Myroides profundi
Pathway
mpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPR_2212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpw03019
]
MPR_2212
Enzymes [BR:
mpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MPR_2212
Messenger RNA biogenesis [BR:
mpw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPR_2212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
P-loop_SecA
AAA_22
CMS1
AAA_19
ERCC3_RAD25_C
T4_y05I_C
Stn1_C
Motif
Other DBs
NCBI-ProteinID:
AJH15383
UniProt:
A0AAJ5BFD5
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All DBs
Position
2489012..2490124
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AA seq
370 aa
AA seq
DB search
MNFKDLALTQEIQTALTKIGYSTATEIQQKAIPPILEGTDVIGTAQTGTGKTAAFAIPIL
QKLHSTPKSTKGIRALILVPTRELAIQVKDSFLDYSTELPLKTVTLFGGVPLPPQVRALK
QHPEIIVATPGRLLDLINQKIVKLSNLEILVLDEADQMLDMGFIHDLKKILKFVPTKRQS
LFFSATMPKEIEQFARTIVYKPVKIEVAAQVITATTIEQQVYYTEKKDKKALLHTILKEN
TESTLVFTRTKYEANNLVKYLQKVNMVAMAIHGNKSQSARVKALDDFKNKKINILIATDI
AARGIDISKLPFVINYDIPDKPETYVHRIGRTGRAGVQGVAMCFCTPEQRKELKDIQRFT
GIKMQVKQEI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaactttaaagatttagcattaacacaagagatacaaacagcattaactaaaataggt
tattctacagctactgaaatacagcaaaaagcaatccctcctattctggaaggaacggat
gtaatcggtactgctcaaacaggtacaggtaaaactgctgcttttgctattcctatttta
caaaaactgcactctactcctaaatctacaaaaggtataagagccttaattttagttcct
acaagagaattagcaatacaggtaaaagatagttttttagactatagtactgagcttcct
cttaaaacagtaactttattcggtggtgtacctcttccacctcaagtaagagcgttaaaa
caacatcccgaaattatcgtggctactcctggtcgactattggatctaatcaatcaaaaa
atagtaaagctttctaatcttgagatattagtactagatgaggctgatcagatgcttgat
atgggattcatacacgatcttaaaaaaattcttaaatttgttcctactaaaagacaatct
ctgttcttctcagctacaatgcctaaagaaatagagcaattcgctagaacaatcgtctac
aaacctgtaaaaatagaagtagctgcacaagtaatcacagcaacaactatcgaacagcaa
gtgtactatacagagaagaaagataagaaagcgttattacacactatcttaaaggagaat
acggagtctactcttgtatttacaagaacgaaatacgaggctaataacctggtaaaatac
cttcaaaaggtcaatatggtggcgatggctatccatgggaataaatctcaaagtgctcgt
gttaaagcattagatgattttaaaaataagaaaatcaatatccttattgcaacagatatt
gctgcaagaggaatagatataagcaaacttccctttgtgatcaactatgatataccagac
aaaccagagacttacgttcatcgtatcggtcgtactggacgagctggagtacaaggggtt
gccatgtgtttttgcacacctgaacaacgaaaagagttgaaggatattcagcgatttaca
gggatcaaaatgcaggtaaaacaagaaatttaa
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