Myroides profundi: MPR_2899
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Entry
MPR_2899 CDS
T03631
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mpw
Myroides profundi
Brite
KEGG Orthology (KO) [BR:
mpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpw03400
]
MPR_2899
DNA repair and recombination proteins [BR:
mpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MPR_2899
Archaeal homologous recombinant proteins
MPR_2899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_23
AAA_21
AAA_29
ABC_tran
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
AJH16042
UniProt:
A0AAJ5BF15
LinkDB
All DBs
Position
complement(3259366..3262410)
Genome browser
AA seq
1014 aa
AA seq
DB search
MIPIKLTIEGLYSYQEKQVIDFTSLIEAGLFGIFGKVGSGKSSILEAISFGLYGETERMN
SRDNRAYNMMNLKSDRSVIDFEFYNFKDEKYRIYREFRRNSKRFDDVKRGEATLYKDEDG
IWVPQKELNIQEVVGLSYENFKRTIIIPQGKFREFIELGGKDRTKMMQEIFGLDRFDLAD
KTKRLYSSTKESLNLVEGELKSFSQVTTEQIAEQKALHLQETEKFNLLNKTFKEENDSYQ
KVKAVKDDFEALAIKKVELGTLEVKLPEITAQKNELSQYEQLDKAFSTVLLEQQKTADKA
VNREARLATLTKETTELQSQFKKVTDELKVAEQQYAGLEHLKAELYELNLIKEIKKANLA
KETLLERYHKGKSFVVDAEKALEGSKLALAQKEMELNTAKTARVDTTMLMAIEAWFSQQS
FIHKGIQDVQQHMNALQTELQIVEKDILGLKLKDINHWEQEIEKYRNLFEQEINAIEVEL
RNHRVAQQLAQYANELHEGQPCPLCGSAHHPHILQGDDVSSAIQQCELRLSDIKDKQERL
KKYERKAAGLFDKKKLLTTQWQESQQREQHLQQELVSHQQNFVWTVIEKGNEAQFIKLKQ
RAELANKQVEALEIQYTTVGKEVEQHRGHVDKFTKELNAIEVEGVSLDSEIKSKSTQIIR
LQIETYLSLEETLLVQQVQQREANVTLVEQRYKDLTNQYQMMSPKLASLQTESNSVQVEL
NELKVAVDQFNEQIKALLITHQVQSVEEVRSVLDRQINVVERREQIQAFEVQLEVVRNAV
STLEVKLEGISFDQEKFAKQQEVITKLELQVKEATEAVAKLAGEIDRLEKDYAKKQNLQK
QYDAIEKRVKNLNTLLTMFSGAGFVNYVSAIYLKNLCDMANARFHRLTNNQLSLQLNEAN
EFEIIDYLNNGKARSVKTLSGGQSFQVSLSLALALAESVQSLSKSDRNFFFIDEGFGTQD
SESVNIVFETLSNLHKENRIVGIISHVDELQERIPMSLSVVKDEERGSEVVINY
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgataccaattaagttaacgatagaaggactgtattcttatcaagaaaaacaagttatt
gacttcactagtcttatagaggcagggttattcggtatattcggtaaggtaggatcggga
aagtcttctattttagaagctatttcttttgggctttacggagagacagagcgtatgaac
tctcgcgataaccgtgcatataatatgatgaacctaaagtctgaccgttcggtaatagac
tttgagttttataattttaaggatgagaaataccgcatctatagagagtttagaagaaac
tctaagcgcttcgatgatgtaaagagaggtgaggcaacactgtataaggatgaagatggt
atctgggtacctcagaaagagttgaatatacaggaagtagtggggctgagctatgagaac
tttaagcgtactatcattatcccacaagggaagttcagagagtttatagaattaggagga
aaggacagaacgaagatgatgcaagagatattcggcttagaccgttttgatctcgcagat
aagactaaacgattatatagctcgacgaaggagagtctgaatttagtagaaggagagcta
aagagctttagccaagtcacaacggagcagatagcagagcaaaaagcgctacatcttcaa
gagacggagaagtttaacctactgaataagacttttaaagaagagaacgacagttatcaa
aaggtcaaagcagtgaaggatgacttcgaagccttggcgataaagaaagtagagttaggt
acattagaagtgaagttacctgagataactgctcagaagaacgaattgtctcagtatgag
caattagataaagcattctctactgtactgttagaacaacaaaagacagcagataaggcg
gtgaatcgagaggctcgattagctacattgacaaaagaaactacagagctacaaagtcag
tttaagaaagtgacagatgagctaaaggtagcagaacaacagtatgcaggtttagaacac
ctcaaagcagagttgtatgagttgaatttgatcaaagaaatcaagaaagccaatctcgct
aaggagaccttattagagcgttatcacaaagggaagtctttcgtggtagatgctgagaag
gcattagaagggagcaaacttgctttagcacaaaaggagatggaactaaatactgccaaa
acagctagagtagatacaacaatgctgatggctatagaggcatggttcagtcagcaatct
tttattcacaaagggattcaagatgtgcaacagcatatgaatgcactacagacagagttg
caaatagtagaaaaggatatcttaggtctaaagttaaaggatatcaatcattgggaacaa
gagatagagaagtacagaaacctatttgaacaagagatcaatgcgatagaagtagagttg
cgcaatcatagagtagctcaacagttagcacagtatgctaacgagcttcacgaagggcaa
ccttgtcctttatgtggttctgcacatcaccctcatattcttcagggagacgatgtgtct
tctgctatacagcagtgtgaacttcgtctaagtgatataaaggataaacaggagcgacta
aagaaatacgaaaggaaagcagctggtctttttgataaaaagaaactcttaacaacacag
tggcaagaaagccaacagagagaacaacacttgcaacaggagttagtctctcatcagcag
aactttgtttggacagtgatagaaaaggggaatgaagcacagtttatcaagttaaaacaa
agagctgagctagcgaataagcaagtagaagctctagagatacaatatactacagtagga
aaagaagtagaacagcacagaggtcatgtagataagtttaccaaagaactaaatgcaata
gaggtagaaggtgttagtctagatagtgagatcaagtctaagagcacgcagattataaga
ctgcagatagagacctatctaagtttagaggagactttattagtacaacaagtacaacaa
cgagaagcgaatgtaaccttagtagaacaacgctataaagatctaacgaaccaatatcag
atgatgtctcctaagttggcaagtttacagacagagagcaatagtgtacaggtagaatta
aatgaattgaaagtagctgttgatcagtttaacgagcagattaaagctttattaatcact
catcaagtacaatctgtagaggaagtgcgtagtgtgttagatagacagattaatgtcgta
gaacgcagagaacaaatacaagcattcgaagttcaactagaggtagtccgtaatgctgtg
agtactttagaagtgaagttagaaggtatttcttttgatcaagagaagttcgctaaacag
caagaagtaataacgaagttagaactccaggtcaaagaagcgacagaagctgtggctaag
ttggcaggagagatagatcgtttagaaaaagactatgcgaagaagcagaacttacagaag
cagtatgacgcaatagaaaaacgggtgaagaatctgaatacgctattgacgatgtttagt
ggagctggttttgtaaactatgtgtcagctatctatctaaagaacttatgcgatatggcg
aatgctcgtttccatcgattgacgaataaccaattgagcttacagttaaacgaagcgaat
gagtttgagatcatagattatttaaacaatgggaaagcgagaagtgtgaagaccttatct
ggaggacagagctttcaggtgtctttatctctagcgttagccttagcagagagtgtacag
agtctgtctaagtcagatagaaacttcttctttatagatgaggggttcggtacacaggat
agtgagtcagttaatattgtattcgagacgttgagcaatctgcataaagagaataggata
gtaggtattatctctcacgtagacgaactacaagaacgtattcctatgtctctatccgtt
gtaaaagatgaagaacgaggtagtgaagtagttataaattattag
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