Melissococcus plutonius DAT561: MPD5_0316
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Entry
MPD5_0316 CDS
T01763
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpx
Melissococcus plutonius DAT561
Pathway
mpx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPD5_0316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpx03021
]
MPD5_0316
03400 DNA repair and recombination proteins [BR:
mpx03400
]
MPD5_0316
Enzymes [BR:
mpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPD5_0316
Transcription machinery [BR:
mpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPD5_0316
DNA repair and recombination proteins [BR:
mpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPD5_0316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BAL61597
LinkDB
All DBs
Position
1:346521..350174
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNNFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIEPGNTSLEKKQLLTEREYREKREQYGQEFTAAMGAEAIKQLLD
NVDVEGEVAELKEELKTAQGQKRTRAIRRLDILEAFRSSGNQLSWMIMDVIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE
MALELFKPFVMRELVQREIATNIKNAKRKIERQEDEVWDILEEVIQEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLACEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEKDREGEGMIFRDMNEAVLAWQNGYVHLHSRIGVQ
TTLLGEKPFTEWQKERILITTVGKIIFNEIMPMEFPYLNEPTDYNLTVQTPDKYFVEAGV
DIPAHIKEQELILPFKKKNLGNIISEVFKRFHVTETSKMLDRMKDLGYKHSTYAGMTVGI
ADIMVLHEKQAIIDEAHKQVDVITKQFRRGLITNTERYERVIAVWNASKDEIQQELMESL
DAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGQIMELPIISNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLEIQAIREGNEIIESLE
ERLIGRYTRKSVIHPETKKVIIGENQLISEDIAREIIDAGIEKVTIRSVFTCNTKHGVCH
HCYGRNLATGSDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVITEVTGEVIAITEDPATRTKEVTIKGDTDTRTYTVPYTARMKVAEGDNIH
RGTPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKVR
IMDPGDTEILPGTLMDISEFKDRNYDTLIVGGIPATSRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMARYRNMEPKEVKETSKNVYSIS
DIEAQMAAEDALNELNK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgtaaataattttgaaagtatgcaaattggattagcttctccagaaaaaatt
agaagctggtcatatggtgaagtaaaaaaacctgagactattaattatcgaacactgaaa
ccagagcgtgaaggtttgttttgtgagcgaatctttggaccaacgaaagactgggaatgt
gcctgtgggaagtacaagagaattcgttataaaggcattgtttgtgatcgctgtggcgtt
gaagttactcgttctaaggtacgtcgtgagagaatgggacatattgaactagcagcacct
gtatcacatatttggtactttaaaggaattccttcacgaatgggtctagttttagatatg
agtccgcgtgctttggaagaaattatctattttgcctcttatgtagttattgagcctgga
aatacatcacttgaaaagaaacaattattgacagaacgtgaatatagagaaaaacgtgag
caatatggacaagaattcactgctgcaatgggtgcagaagcaattaagcagttacttgac
aatgttgatgttgaaggtgaagtagctgaattaaaagaagagttgaaaacagcacaagga
caaaaacggacacgtgctattcgtcgtttggatatacttgaagcatttcgatcttctggt
aatcaattaagttggatgattatggacgttattcctgttattccacctgatttacgacca
atggttcagcttgaaggtggacgtttcgctacttctgatttgaatgatttatatcgacgt
gtaattaaccgaaataatcggttaaaacgattattagatttaaatgcaccgaacattatt
gttcaaaatgaaaaacgtatgttacaagaagcggtagatgcattgattgacaatggtaga
cgtggtcgtccggtaactggaccagggaatcgtccattaaagtccttatcacatatgttg
aaaggaaagcaaggtcgtttccgtcaaaacttattaggaaaacgtgttgattattcgggt
cgttcagttattgttgttggtccatttttaaaaatgtatcagtgtggactaccaaaagaa
atggcacttgaattattcaaaccatttgtgatgcgtgagttggttcagcgtgaaattgct
acgaatatcaaaaatgctaaacgaaaaattgaacgtcaagaagatgaagtttgggatatt
ttggaagaagttattcaagaacatcctgttttattaaaccgggcacctacactgcataga
ttaggtattcaggcgtttgaaccagtattggttgaaggacgtgccattcggttgcatcca
ttagcgtgtgaagcttataatgctgactttgatggtgaccaaatggcagtacacgtaccg
ttgaatgaagaagctcaagcagaagcaagaatgttaatgttagctgctcaaaatattcta
aatcctaaggatggaaaaccagttgttacgccgtcacaagatatggttttaggaaattat
tatttgacaatggaagaaaaagatcgtgaaggcgaaggaatgatcttccgtgatatgaat
gaagcagtattagcttggcagaatggttatgtgcatttgcattcaagaattggtgttcaa
acaacattattaggcgaaaaaccatttactgaatggcaaaaagaacgtattttaattaca
acagttggaaaaattattttcaatgaaatcatgccaatggaatttccttatttaaatgaa
ccaacagattataatctgactgttcaaactccagataaatactttgttgaagcaggggta
gacattcctgcccatattaaagaacaggaattaattctgccgtttaagaagaaaaatcta
ggaaatatcatctcagaagtcttcaaacgattccatgtcacggaaacatctaaaatgctg
gatcgaatgaaagatttaggatataaacattcaacctatgctggaatgacagttgggatt
gctgatatcatggttttacatgaaaaacaagcaattatcgatgaagctcataagcaagtt
gatgtcataacaaaacaatttcgtcgtggattaattacaaacactgaacgttacgagaga
gttattgctgtatggaatgcttcaaaagatgaaattcaacaggaattgatggaaagtttg
gatgctaaaaatccaatctttatgatgtctgattctggtgctcgtggtaatatttctaac
tttactcagcttgctgggatgcgtggattgatggcagctcctaatggacagattatggaa
ttaccaattatttctaatttccgtgagggactatccgtattagaaatgttcatctcaact
catggtgctcgtaaaggaatgacagatacggcacttaaaacagccgattctggatatttg
acacgtcgtctagtcgatgttgctcaagatgttattattcgtgaagatgattgtggtaca
gatcgaggtcttgaaattcaggcaattcgtgaaggaaacgagattattgaatccttagaa
gaacgtttaattgggcgttacacgagaaaatcagtgatccatccagaaactaaaaaggta
attattggtgaaaatcaattgatctctgaagatattgctagagaaattattgatgctggc
attgaaaaagtaacaattcgctctgtatttacctgtaatactaaacacggtgtttgtcat
cattgttatggacgtaatttggcaaccggttctgatgttgaggttggtgaagcagttgga
acaattgcagctcagtctatcggtgaaccaggtacacagttgactatgcgtactttccat
acaggtggagttgctggagatgatattactcaagggttacctcgtattcaagaaattttt
gaagcacgtaatccaaaaggtcaagctgtaattactgaagttaccggtgaagttattgca
attactgaggatccagcaactcgtacgaaagaagtaacaattaaaggcgatacagataca
agaacttatactgtcccttacacagcacgtatgaaagttgctgaaggagataatattcat
cgtggaacaccattaactgaaggatccatcgatccaaaacaattattacaagtacgtgat
gttctttcagttgaaaattacttattgcgtgaagtacaacgagtttaccgcatgcaaggt
gtggaaattggtgataagcatattgaagtaatggttcgtcaaatgttgagaaaagttcgt
attatggatccaggtgataccgaaatcttaccaggtactttaatggatatatcagaattt
aaagatcgtaattatgatacattaattgttggtggtataccagcaacaagtcgtccagta
ttattaggtattactaaagcttcattagaaacaaatagcttcttatcagcagcttctttc
caggaaacaacacgtgtattgacagatgcagcaattcgtggaaagaaagatccgttgctt
ggtttgaaagaaaatgtaattattggtaaaatcattcctgctggcacaggaatggctcgt
taccggaacatggaaccaaaagaagtaaaagaaacaagtaaaaatgtgtatagcatttct
gatattgaagcacaaatggcagctgaagatgctttaaatgagttaaataaataa
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