Melissococcus plutonius DAT561: MPD5_0764
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Entry
MPD5_0764 CDS
T01763
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mpx
Melissococcus plutonius DAT561
Pathway
mpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPD5_0764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpx03019
]
MPD5_0764
Messenger RNA biogenesis [BR:
mpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MPD5_0764
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
P8
Motif
Other DBs
NCBI-ProteinID:
BAL62007
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All DBs
Position
1:837432..839117
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AA seq
561 aa
AA seq
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MDTIKIIPLGGVRENGKNMYITEVGEEIFVLDCGLKYPENDLLGIDIVIPDFTYLEENRD
RIAGVFLTHGHADAIGALPYLLSKLKIPVFGTKLTIELAKLNIHGHSGRENFDDFHIIDE
HTEIDFANTTVSFFRTTHTIPDSVGISLKTSEGSIVYTGDFKFDPSAIPMYQTDFGRLAE
IGKENVLALLSDSSNAENPEQIASERQIADEVFDTIRYWNGRIIVACVANNLQRVQQILN
AAHQSKRKIVLRGQDFTKVIHLAIQAEKLQLPSEDLIISIKEMEKYQPEQLLILETGRMG
EPLEALQKMADNPQEDIHIQEGDLVYITTTPSTAMETTVAKTENIVYRAGGIVKLISSDL
CVSGHANPDGLQLMLNFMKPKYFIPIQGEYRQLAAHADLAYELAIPYKNIFITGRGDVLE
YKNNQMNVAGSVPAENIMIDGLGVGDIGNIVLRDRRILSEDGIFVAVITINRKEKRIVSP
AKITSRGFVYVKASKDLMKESSNMITEIVEKHLANDDFEWSKLKQDIRENLSHYLFEQTK
RRPVILPVIMEINQKRYTKNV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtggatacaattaaaattattccattaggtggcgtacgcgaaaatggaaaaaatatgtat
attacagaagtaggagaggaaatttttgttttagattgtgggttaaaataccctgaaaac
gatcttttaggtattgatattgttattcctgattttacttatctagaagaaaatcgtgat
agaattgctggtgtatttttaacacatggacatgctgatgccattggtgcattgccttat
ttattgtctaaattaaaaataccggtatttggcacaaagttaacgattgaattagcaaaa
ttaaacatacatggtcattcaggaagagaaaattttgatgatttccatattattgatgaa
catacagaaattgattttgcaaatacgacggttagtttctttcgaacgacccatacaatt
cctgattctgttggaataagtttaaaaacatctgaaggatcgattgtttatacaggtgat
ttcaaatttgatcccagtgctattccaatgtatcagacagattttggacgtttggctgaa
attggtaaggaaaatgtcttagctttattgagtgattcttcaaatgctgaaaatccagag
caaattgcttcagaacgtcagattgcagatgaagtctttgatacgattcgttattggaat
ggacgaattattgttgcctgtgtagctaataatcttcagcgtgtacagcaaatactaaat
gctgctcatcaatcaaaacgcaaaattgttcttagaggacaagactttacaaaagtgatt
catctagccattcaggcagaaaaattacaactaccaagtgaagatttaattatttctatt
aaagaaatggaaaaatatcaacctgagcaattattgattttagaaacgggacggatgggt
gaaccgcttgaagccctacaaaaaatggcagacaatccacaagaagacattcatattcaa
gaaggtgatcttgtctatattacaacgactccatcaacagccatggaaacgacagtagca
aaaactgagaatatcgtctatcgggcaggtggcattgttaaattaatttctagtgatcta
tgtgtttccggccatgctaatccagatggattacaattaatgttgaattttatgaaacct
aaatattttattccaattcaaggagagtatcgtcagctggcggcacatgctgatttggcg
tatgaattggctattccgtataaaaatatttttattactggccgtggggatgttttagaa
tataagaataatcagatgaacgtggcaggaagtgtacctgctgagaatattatgattgat
ggtcttggtgttggtgatataggaaatattgttttaagagatcgtcgaattctttcagaa
gatggtatctttgttgctgttattactatcaaccgaaaagagaagcgaattgtttcacca
gcaaagattacctctagaggatttgtttatgtaaaggcgagtaaggatttaatgaaagaa
agtagtaatatgattactgaaattgttgaaaaacatttggctaatgatgattttgaatgg
agtaaattaaaacaagatattcgtgaaaaccttagtcattatttatttgaacaaaccaaa
cgtcgaccagtaattttaccggtaattatggaaattaatcaaaaaaggtatacaaaaaac
gtttaa
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