KEGG   Methanolobus psychrophilus: Mpsy_1051
Entry
Mpsy_1051         CDS       T02280                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
mpy  Methanolobus psychrophilus
Pathway
mpy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mpy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Mpsy_1051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpy03400]
    Mpsy_1051
DNA repair and recombination proteins [BR:mpy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Mpsy_1051
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Mpsy_1051
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_22 RsgA_GTPase AAA_21 nSTAND1 AAA_18 AAA_33 nSTAND3 DnaJ_CXXCXGXG AAA_23 APS_kinase Viral_helicase1 BCA_ABC_TP_C AAA_25 cobW T2SSE PRK MMR_HSR1 NTPase_1 Zn_ribbon_8 dNK
Other DBs
NCBI-ProteinID: AFV23260
LinkDB
Position
1052422..1055253
AA seq 943 aa
MSLSNIVIKGAKEHNLKNLDLTLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGLMEKPDVEYIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLYARIGIR
HCPQCGRIIETQSVDQIVDSIMKLPEDSKIHVLAPVVRERKGEYRKLLADLLADGFTRAR
IDGEIHSLEDVDSIDLERYVKHNIEVLVDRLVIKKGIEERLSESVETALEKGGGTLTVQI
VDGEEMTFSENLACSECGIGFEEMEPAAFSFNSPQGACPECHGLGTSMEFDPDLIVPDKT
LTLAQGAIEPWDSKTKDGYYMQSLESLARYKKFSMDIPFSKLDPEIQHIIFYGSEEPIPF
SHTGRNGGTWRHTGRFKGVIANLSKVFEKTESESSKDRMQRYISTKPCPVCQGKRLKPAS
LAVKVDGYNIIEVTGMSVEECLHFFQMLEAKLNEREYAIARLILKEIKARLGFLVDVGLD
YLTLSRSAATLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNLRLINTLRHLRD
IGNTVLVVEHDEETICSADHVVDMGPGAGIHGGEIVAEGSLEEIMDNEDSNTGKYLSGKL
KIDIPEKRRKSKNMLMLYGAGENNLKDVDVSFPLGILICVTGVSGSGKSTLINETLNKVL
AKRLNRAREIPGKFREIEGLEHVDKVITIDQSPIGRTPRSNPATYTNLFTPIRELFAQTK
TSRARGYQAGRFSFNVRGGRCEACSGDGIITIEMHFLPDVYVPCEVCHGKRYNRETLEVT
YKDKNIAEVLDMTVEEALGFLENIPAINRKLRTLYDVGLGYIKLGQSSTTLSGGEAQRVK
LATELSKRSTGKTVYILDEPTTGLHFDDVKKLLEVLQRLVEAGNTVIVIEHNLDVIKTAD
WIIDMGPEGGARGGEVIAEGTPEEIAKSEVSHTGQFLRKVLAK
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgtccttaagtaatatagtaataaaaggtgcaaaggaacataaccttaagaaccttgac
ctgacattgccccgggataaacttattgtgataacagggctcagcggttccgggaaatcg
tcccttgcttttgataccatctacgccgaagggcagagaaggtatgtggagtcgctctca
gcgtatgccaggcagtttttggggcttatggaaaaacctgatgtcgagtacatagaaggg
ttgtccccggccatatccatcgagcagaagaccacaagcaaaaaccccaggtcaactgtg
ggcacggtgaccgagatatacgattatcttagacttctctatgctagaataggtatcagg
cactgtccacaatgcggaaggatcattgagacccagagcgtggaccagatagtggacagt
ataatgaaactcccggaggattcaaagatacatgtgcttgctccggttgtaagggaaagg
aaaggcgagtacaggaaactgctcgcggacctgcttgccgacggcttcacaagggcacgt
atagatggcgagatccactcgctggaagatgtggacagtatcgatcttgaacgctatgtc
aagcacaatatcgaagtacttgtggacaggcttgtaataaagaaaggcatcgaggaaagg
ctatcggaatcagtggaaactgctcttgaaaagggcggaggcactcttactgtgcagata
gttgatggcgaggaaatgaccttcagcgagaacctggcctgttcagaatgtggcatcggc
tttgaagaaatggaacccgcagcattctcttttaatagtccgcagggcgcatgtccggaa
tgccacggacttggcacttcaatggaattcgaccctgacctgatagtgccggataagaca
ctgaccctggctcagggtgccatcgagccctgggacagcaagaccaaggacggctactac
atgcaatccctggaatcacttgccaggtacaagaaattctccatggatataccgttcagc
aaactggacccggagatacagcacatcatattctacggcagcgaggaacccatacccttc
tcccataccggcaggaacggtggcacctggaggcatactggcaggttcaagggagttatt
gcaaatctgtccaaggtatttgagaaaacggaatcagagagcagtaaagacaggatgcaa
cgatacatcagtacgaaaccctgccctgtctgccagggaaaaaggctcaagcctgccagc
ctcgcggtaaaggttgacggctacaacatcattgaagttaccgggatgtctgttgaagaa
tgcctgcactttttccagatgctggaggcaaagctcaacgaacgtgaatatgccattgcc
cgccttatcctgaaagagataaaggccaggcttggattcctggttgatgtaggactggat
tacctgactctgagcaggtcggctgcaaccctttccggaggagaggcacagcgtatccgg
cttgcaacccagatcggctcaagcctgatgggagtgctgtatatccttgacgagcccagt
atcggcctgcatcagagggacaacctgcggctcatcaacaccctcaggcacctgagggat
atcggcaacaccgtacttgtggtggaacacgatgaggaaactatctgcagcgcggaccac
gtagttgatatgggcccgggagccggaatccatggaggagaaatagttgcagaaggcagc
ctcgaagagataatggataatgaagactccaacactggaaaatacctgagtggcaaactg
aagatagatatcccggagaagaggcgtaagtctaagaacatgcttatgctgtatggagcc
ggcgagaataatctcaaagatgtggacgtctctttcccattgggcatacttatctgcgtt
accggggtatccggttctggcaagagcacgttaatcaatgagaccctgaacaaggtgctt
gcgaaaagacttaacagggccagggaaataccaggaaagttcagggaaatagagggcctt
gagcacgtggataaggtcataaccatcgaccagtcacctatcggaaggactccaagatca
aatcccgctacctatactaatctctttacacccataagggagctttttgcgcagacaaag
acctcccgtgcaagaggataccaggcaggccgtttcagttttaatgtacgcggcggcagg
tgcgaggcatgttccggcgatggaataatcactatcgagatgcattttctgccggatgtg
tacgtaccctgtgaagtgtgccacggaaagcgctacaaccgcgagaccctggaggtcact
tacaaggacaagaacatagccgaggtgctggacatgaccgttgaggaggcccttggattc
cttgagaacataccggccattaaccgtaagcttcggacactttacgatgtgggcctggga
tacataaaacttggccagtcatccacgaccctgtcaggcggcgaggcccagagggttaaa
ctggcgaccgagcttagcaagcgctccaccggcaagaccgtctacatccttgacgagcct
accacaggactgcatttcgatgacgtgaagaaactccttgaagtgctccagagacttgtg
gaagcaggcaataccgtaatagtcatcgagcataacctcgatgtgataaagactgcagac
tggatcattgacatgggacccgaaggcggtgccagaggcggggaggttattgcagaaggg
acacccgaggagattgcaaagagcgaagtatcccatacggggcagttcctgaggaaagtg
ctggcgaagtga

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