Entry |
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Name |
(GenBank) excinuclease ABC subunit A
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KO |
K03701 | excinuclease ABC subunit A |
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Organism |
mpy Methanolobus psychrophilus
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mpy00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mpsy_1051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mpy03400]
Mpsy_1051
DNA repair and recombination proteins [BR:mpy03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mpsy_1051
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mpsy_1051
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1052422..1055253
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AA seq |
943 aa
MSLSNIVIKGAKEHNLKNLDLTLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGLMEKPDVEYIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLYARIGIR
HCPQCGRIIETQSVDQIVDSIMKLPEDSKIHVLAPVVRERKGEYRKLLADLLADGFTRAR
IDGEIHSLEDVDSIDLERYVKHNIEVLVDRLVIKKGIEERLSESVETALEKGGGTLTVQI
VDGEEMTFSENLACSECGIGFEEMEPAAFSFNSPQGACPECHGLGTSMEFDPDLIVPDKT
LTLAQGAIEPWDSKTKDGYYMQSLESLARYKKFSMDIPFSKLDPEIQHIIFYGSEEPIPF
SHTGRNGGTWRHTGRFKGVIANLSKVFEKTESESSKDRMQRYISTKPCPVCQGKRLKPAS
LAVKVDGYNIIEVTGMSVEECLHFFQMLEAKLNEREYAIARLILKEIKARLGFLVDVGLD
YLTLSRSAATLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNLRLINTLRHLRD
IGNTVLVVEHDEETICSADHVVDMGPGAGIHGGEIVAEGSLEEIMDNEDSNTGKYLSGKL
KIDIPEKRRKSKNMLMLYGAGENNLKDVDVSFPLGILICVTGVSGSGKSTLINETLNKVL
AKRLNRAREIPGKFREIEGLEHVDKVITIDQSPIGRTPRSNPATYTNLFTPIRELFAQTK
TSRARGYQAGRFSFNVRGGRCEACSGDGIITIEMHFLPDVYVPCEVCHGKRYNRETLEVT
YKDKNIAEVLDMTVEEALGFLENIPAINRKLRTLYDVGLGYIKLGQSSTTLSGGEAQRVK
LATELSKRSTGKTVYILDEPTTGLHFDDVKKLLEVLQRLVEAGNTVIVIEHNLDVIKTAD
WIIDMGPEGGARGGEVIAEGTPEEIAKSEVSHTGQFLRKVLAK |
NT seq |
2832 nt +upstreamnt +downstreamnt
atgtccttaagtaatatagtaataaaaggtgcaaaggaacataaccttaagaaccttgac
ctgacattgccccgggataaacttattgtgataacagggctcagcggttccgggaaatcg
tcccttgcttttgataccatctacgccgaagggcagagaaggtatgtggagtcgctctca
gcgtatgccaggcagtttttggggcttatggaaaaacctgatgtcgagtacatagaaggg
ttgtccccggccatatccatcgagcagaagaccacaagcaaaaaccccaggtcaactgtg
ggcacggtgaccgagatatacgattatcttagacttctctatgctagaataggtatcagg
cactgtccacaatgcggaaggatcattgagacccagagcgtggaccagatagtggacagt
ataatgaaactcccggaggattcaaagatacatgtgcttgctccggttgtaagggaaagg
aaaggcgagtacaggaaactgctcgcggacctgcttgccgacggcttcacaagggcacgt
atagatggcgagatccactcgctggaagatgtggacagtatcgatcttgaacgctatgtc
aagcacaatatcgaagtacttgtggacaggcttgtaataaagaaaggcatcgaggaaagg
ctatcggaatcagtggaaactgctcttgaaaagggcggaggcactcttactgtgcagata
gttgatggcgaggaaatgaccttcagcgagaacctggcctgttcagaatgtggcatcggc
tttgaagaaatggaacccgcagcattctcttttaatagtccgcagggcgcatgtccggaa
tgccacggacttggcacttcaatggaattcgaccctgacctgatagtgccggataagaca
ctgaccctggctcagggtgccatcgagccctgggacagcaagaccaaggacggctactac
atgcaatccctggaatcacttgccaggtacaagaaattctccatggatataccgttcagc
aaactggacccggagatacagcacatcatattctacggcagcgaggaacccatacccttc
tcccataccggcaggaacggtggcacctggaggcatactggcaggttcaagggagttatt
gcaaatctgtccaaggtatttgagaaaacggaatcagagagcagtaaagacaggatgcaa
cgatacatcagtacgaaaccctgccctgtctgccagggaaaaaggctcaagcctgccagc
ctcgcggtaaaggttgacggctacaacatcattgaagttaccgggatgtctgttgaagaa
tgcctgcactttttccagatgctggaggcaaagctcaacgaacgtgaatatgccattgcc
cgccttatcctgaaagagataaaggccaggcttggattcctggttgatgtaggactggat
tacctgactctgagcaggtcggctgcaaccctttccggaggagaggcacagcgtatccgg
cttgcaacccagatcggctcaagcctgatgggagtgctgtatatccttgacgagcccagt
atcggcctgcatcagagggacaacctgcggctcatcaacaccctcaggcacctgagggat
atcggcaacaccgtacttgtggtggaacacgatgaggaaactatctgcagcgcggaccac
gtagttgatatgggcccgggagccggaatccatggaggagaaatagttgcagaaggcagc
ctcgaagagataatggataatgaagactccaacactggaaaatacctgagtggcaaactg
aagatagatatcccggagaagaggcgtaagtctaagaacatgcttatgctgtatggagcc
ggcgagaataatctcaaagatgtggacgtctctttcccattgggcatacttatctgcgtt
accggggtatccggttctggcaagagcacgttaatcaatgagaccctgaacaaggtgctt
gcgaaaagacttaacagggccagggaaataccaggaaagttcagggaaatagagggcctt
gagcacgtggataaggtcataaccatcgaccagtcacctatcggaaggactccaagatca
aatcccgctacctatactaatctctttacacccataagggagctttttgcgcagacaaag
acctcccgtgcaagaggataccaggcaggccgtttcagttttaatgtacgcggcggcagg
tgcgaggcatgttccggcgatggaataatcactatcgagatgcattttctgccggatgtg
tacgtaccctgtgaagtgtgccacggaaagcgctacaaccgcgagaccctggaggtcact
tacaaggacaagaacatagccgaggtgctggacatgaccgttgaggaggcccttggattc
cttgagaacataccggccattaaccgtaagcttcggacactttacgatgtgggcctggga
tacataaaacttggccagtcatccacgaccctgtcaggcggcgaggcccagagggttaaa
ctggcgaccgagcttagcaagcgctccaccggcaagaccgtctacatccttgacgagcct
accacaggactgcatttcgatgacgtgaagaaactccttgaagtgctccagagacttgtg
gaagcaggcaataccgtaatagtcatcgagcataacctcgatgtgataaagactgcagac
tggatcattgacatgggacccgaaggcggtgccagaggcggggaggttattgcagaaggg
acacccgaggagattgcaaagagcgaagtatcccatacggggcagttcctgaggaaagtg
ctggcgaagtga |