Methanolobus psychrophilus: Mpsy_1389
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Entry
Mpsy_1389 CDS
T02280
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpy
Methanolobus psychrophilus
Pathway
mpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpsy_1389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpy03019
]
Mpsy_1389
03400 DNA repair and recombination proteins [BR:
mpy03400
]
Mpsy_1389
Enzymes [BR:
mpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mpsy_1389
Messenger RNA biogenesis [BR:
mpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mpsy_1389
DNA repair and recombination proteins [BR:
mpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mpsy_1389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AFV23597
LinkDB
All DBs
Position
1373974..1376091
Genome browser
AA seq
705 aa
AA seq
DB search
MYQTLQKYFGYSEFRPLQKDIIQDVLDGKDTFVLMPTGGGKSLCYQLPALLMDGLTVVIS
PLISLMKDQVDSLRANGVNAAFLNSTQNYTESRKICDDIATNDIKILYMAPERLAMSGTL
SMITKAKVSLFAIDESHCISEWGHDFRPEYRKLSMLKKKFPKVPIIALTATATPKVREDT
LNQLGLTNPKTYIASFNRSNLLYEIRPKKETYDQILQYLRRNKGKGGIIYCQSRKNVDTV
TAKLRKAGFNALPYHAGLSDTQRGRNQEAFIKDKADIIVATIAFGMGIDKPNVRFVIHYD
LPKNLEGYYQETGRGGRDGLECECILFFSHGDRYRIEYFVKQKGRKEERDIALKQLQDMV
NYCVSTTCRRKALLSYFGEELEEDNCGGCDACLRPKETVDGTEEAKLLISCVGELGERYG
MNHVIDVLCGANIKKIKEKKHDKLKTYNSGYRHTRPSWQDMAREMVQQGVVAVEGIRYPL
LKLNKASREVMQGSRKVAFTRIAPLEFPDTQTCEDDEPYEPDTIAKPVTPPRARKAAQNS
DSELFSRLKDLRKEMANLQDVPPYIIFADTSLKQMAAKKPSSKEEMLKITGVGEYKLKKY
GDIFLREIGRYCEEKNGGSTKTPEEKAPSSLQKKTMPDLVEPELPAKDMGKGNDKPGKKH
ETILKTISGLEREMVILARAKLGDSFSEEEIREVWAEVISGSRQE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaactctccagaagtacttcggatattctgagttccgccctcttcagaaagac
ataatccaggatgtgcttgatggaaaggatactttcgtgcttatgcccacaggaggcggg
aagtctctgtgctatcaattgcctgcattgctgatggacgggctgacggttgtgatctct
cccctgatatccctcatgaaagaccaggtcgacagcctcagggccaacggcgtcaatgcg
gcattcctgaacagcacccagaattataccgaatccaggaagatctgcgacgacattgcc
acaaacgacatcaaaatattatatatggcgccggagagacttgcaatgtccggcacatta
tcgatgatcacaaaggcaaaggtcagccttttcgccattgatgagagccactgcatatct
gagtggggccatgatttcaggcctgagtaccgcaaactcagtatgctcaaaaaaaagttc
cccaaagtgccgattattgccctgacagctaccgcaacaccgaaggtgagagaagacacc
ctcaaccagctgggacttacaaaccccaaaacctacattgcaagcttcaaccgcagcaat
cttctttacgaaatcaggccgaaaaaggaaacctatgaccagatattgcagtacctgaga
aggaataagggaaagggcggaataatctactgtcagagccgcaagaacgtagacacagtc
accgcaaagctcagaaaagctggtttcaatgcacttccttaccatgcaggcttgagcgat
actcagagagggagaaaccaggaagctttcattaaggacaaagcagacatcattgtcgca
accatcgcttttggaatgggaattgataagcccaatgtgcgttttgttatccattatgac
cttccgaagaacctggaaggttattaccaggaaaccgggagaggtggcagggatgggctt
gaatgtgaatgcatcctcttcttcagccacggcgacaggtaccgtatagagtattttgtc
aagcagaagggcaggaaggaagagcgggatatcgccctgaaacagcttcaggatatggtg
aattactgtgtgagcacaacatgccgcagaaaagcgcttcttagctactttggggaagaa
ctggaagaagacaactgcggcggatgtgatgcctgtctcaggcctaaggagactgtggat
gggacagaagaagcaaagctgctcatcagctgcgtaggggagcttggcgagcgctatggc
atgaatcacgttatagacgtcctgtgcggtgccaatataaaaaagatcaaggaaaagaaa
cacgacaagctgaagacttacaattcaggctaccgccacacccggcccagctggcaggat
atggcacgcgaaatggtgcaacagggagtggtcgcggtagagggcatcaggtatcccctt
ctcaagctcaacaaggcgagcagggaagttatgcagggctcacgtaaggtagcctttaca
agaattgcgccgcttgaattccctgacactcagacctgtgaggatgatgagccttatgaa
ccggatacaatagcaaagccagtgacaccgccacgagcccggaaagccgcacagaacagt
gacagtgaactgttctccaggctcaaggacctcaggaaggaaatggccaatcttcaggac
gtccccccctacataatattcgcggacacgagcctcaagcagatggctgcaaaaaaacct
tccagcaaggaggagatgctaaagataacaggtgtcggggagtacaagctgaagaagtac
ggcgacattttcctcagggagatcggcaggtattgtgaagagaagaacggcggttctaca
aagactccagaggaaaaggctccgtcatcacttcagaaaaagaccatgccggacctcgtg
gagccggagctgccggcaaaggacatgggaaagggaaatgataagcccggaaagaaacac
gagaccatcttgaagaccatcagcgggcttgaaagggagatggtcatcctggcaagggcc
aaactcggggattccttctcggaagaggagataagggaagtgtgggcggaagtgatctcg
ggaagcaggcaggaatga
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