Entry |
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Name |
(GenBank) SMC domain-containing protein
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
mpy Methanolobus psychrophilus
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Brite |
KEGG Orthology (KO) [BR:mpy00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mpy03400]
Mpsy_1522
DNA repair and recombination proteins [BR:mpy03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mpsy_1522
Archaeal homologous recombinant proteins
Mpsy_1522
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(1501150..1503810)
|
AA seq |
886 aa
MRIKRLQIENIRSYKQLDISFQDGVTVVSGVNGSGKSSLLEACFTCLFGSKTLDKDFVIS
DIIRKGATKASIMLDFEQNGHDYSIEQFFRNDPEKGRASNTGAILRRDSEILFDQPTRTY
DAIRSLLNMDEEAYRNCVYIRQGEIDVLINSRPKDRQKMIDDLLQLGKLEEYRERASSAR
VGVGRHQKDTERRIKEVDAAARDIEESKPVEKLAELRTRSGNLEREISSLNDKKDRALSL
KDETSKKIAEFRELAGKKVSVQSQIKELDEKKTRAYIQIGSMEKSIASSRVGQEELRKRI
RDVCSEFGFDDSDIEKTISRIDTSERSLRDRISNISKNKAVIEKEQTTFADSLAENQKHV
HELGKSVSQGKGKLTGIQSDIETSRAKIAQLEEKKVSVISNLEPLGLTREKLENIEEIFD
LVTDQQKSMHGKEKELFAKFTEIQERIKKSAQLLSEGKCPTCMQDLKGSCIEEATASDSQ
KTKELQTELAALKKKQEALDSKLGRVREARVHRNEIEATGREIESSEENIRSLEKLALEY
QSLLLEHDKKKEELSSRRSLIEESVKGLQDKVRLLKQELEVAEKEHSECLKLLEAARKVR
TDLVEADRMKTDIAQMEDKITNFREMIVIFDGQVAEKNESLREISSKVGDFDITKLESLL
RDYEEAFGVIRSEIFRLQAEREEITKQAGMLESELKRFESLRIVLDQLNNKVDYLNAIYV
DAQELEAMYMRIRSQLRSNNIGALDAFINEIFTFMYTNNAYSHVRLDADYNLTVFEKDGT
SLEPRLLSGGERALFNLVLRCAIYRLLSLGVAGKQAGLPPLIMDEPTVFLDKGHVNQLIK
LIDMMRDIGVGQILVVSHDESLIDSADHVFAVEKDPVTNSSAIIAK |
NT seq |
2661 nt +upstreamnt +downstreamnt
atgaggataaaaagactgcagatagagaacataagaagctataagcaactggacatctct
ttccaggatggtgtgaccgtagtctcaggagtcaacgggagcggaaaatccagcttgctt
gaagcgtgctttacatgtcttttcggcagcaaaacgctcgataaggattttgtcatttca
gatatcatccgaaaaggtgctacaaaagcttctataatgctggatttcgagcagaatggt
catgattactcaatagagcaattcttcaggaatgatcctgaaaagggacgtgcttccaat
acgggtgctatcctcagaagggattctgagatcctctttgaccagcctacacgtacatat
gatgctatccgttcattgcttaacatggatgaagaagcctacaggaactgcgtctacatc
aggcagggtgagatcgatgtgctgataaactccaggccaaaggacaggcagaagatgata
gacgatctcctgcagcttgggaaactggaagagtaccgggagagggcatcaagtgcacgc
gtaggtgttggccgccaccagaaggatacggaacgccgcatcaaagaagtggatgcagcc
gccagggatatagaagaatcaaagcctgttgaaaaacttgcagaactgcgcacacgctcc
gggaatcttgaaagggagatctcctctctcaatgataagaaggaccgtgcgctgtcattg
aaagacgagacctcaaaaaagattgccgaattcagggaattggcaggcaaaaaggtttct
gtccagtcccagataaaggaactcgatgaaaagaagacccgcgcgtatatccagataggg
tccatggagaagagtatcgcttcctcaagagtcgggcaggaggagctacgaaagaggatc
agggacgtttgttctgaattcggctttgatgattcggacatagaaaagacaatatcaaga
atagacaccagtgagcgctcattgagagacaggataagcaatataagcaaaaacaaggcg
gtaattgaaaaagaacaaacgacctttgctgactcgctggcagaaaaccaaaaacatgtc
catgagctgggaaagtctgtttcccagggcaagggaaagcttacaggtatacagtcagat
attgaaacatcgcgcgccaaaatagcacagcttgaggaaaagaaggtttctgttatctca
aaccttgagcctcttggactgacacgggaaaagctggagaacatcgaggagatcttcgat
cttgtgaccgatcagcaaaaaagtatgcatggcaaggaaaaagagctttttgcaaagttt
acagaaatacaggagcgaataaaaaagtctgctcagctcctcagcgaaggaaagtgcccg
acgtgcatgcaggatcttaaaggttcatgcattgaggaggctacagcttcggactcccag
aaaacgaaggagctccagacagaactagctgcattgaagaaaaaacaggaggctctggat
tccaaactggggcgtgtcagggaggccagggttcacagaaatgaaattgaggccacaggc
agggaaatagagtcctctgaagagaacatacgtagtcttgaaaagctggctctggaatac
caatctctgcttcttgagcatgataagaagaaagaggagctctcttcccggcggtccctt
atagaggagtctgtaaagggattacaggacaaagtccggctattgaagcaggaactggaa
gtagctgagaaagagcattctgagtgcctgaaactccttgaggccgctcggaaggttcgc
acggacctcgttgaagcagacaggatgaaaaccgatattgcgcagatggaggacaagatc
acaaatttcagggaaatgatcgttattttcgatggtcaggtcgctgaaaagaatgagtcc
cttcgtgagataagcagcaaggtgggagactttgatataactaagctggaatcactgctc
agggactacgaagaagcctttggtgtcataagatcggagatcttcaggctgcaagcggag
cgggaagagatcacaaagcaggcgggaatgcttgaaagtgagctgaagcgcttcgaaagc
ctgagaattgttcttgaccagctcaataacaaggtggattatctcaatgctatctatgtg
gatgcgcaagagctcgaggcgatgtatatgcgcatccgatctcagttgcgctccaacaat
atcggggccctggacgctttcattaatgagatattcactttcatgtatactaataatgct
tactcccatgtaaggcttgatgcggactacaaccttactgtgttcgagaaggacggaact
tcccttgagcccaggctgctgagcggtggggagcgggctttgttcaaccttgtactaagg
tgcgctatatatcgcctgctttcgcttggcgtagccggaaagcaggccggacttcctcct
ctgatcatggacgagcctacagttttcctggataaaggacatgttaaccagttgatcaag
ctgatagacatgatgcgcgacatcggtgtgggtcagatccttgtagtatcgcatgatgag
tcactgatagattctgcagaccatgtatttgctgtggagaaagaccccgtgactaatagt
tcggcgatcattgcaaaatga |