Methanolobus psychrophilus: Mpsy_1932
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Entry
Mpsy_1932 CDS
T02280
Name
(GenBank) Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mpy
Methanolobus psychrophilus
Pathway
mpy03022
Basal transcription factors
mpy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mpsy_1932
09124 Replication and repair
03420 Nucleotide excision repair
Mpsy_1932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpy03021
]
Mpsy_1932
03036 Chromosome and associated proteins [BR:
mpy03036
]
Mpsy_1932
03400 DNA repair and recombination proteins [BR:
mpy03400
]
Mpsy_1932
Enzymes [BR:
mpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mpsy_1932
Transcription machinery [BR:
mpy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mpsy_1932
Chromosome and associated proteins [BR:
mpy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mpsy_1932
DNA repair and recombination proteins [BR:
mpy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mpsy_1932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Zot
AAA_34
PhoH
Motif
Other DBs
NCBI-ProteinID:
AFV24138
LinkDB
All DBs
Position
1887356..1889467
Genome browser
AA seq
703 aa
AA seq
DB search
MDKIHTSLMNKEIILFEGACGTGKTLSALAPSLHVGRQLQKTVIIATNVHQQMVQFINEA
REIKQSNEVKVAVVKGKTSMCPNGVDYDECALKRDNTFELLETEREIALKKQEMKSASEN
YKRSKDLSLIALRDALAKEMDVAEEKMKDLRDRSCNHLYEVLRSDSESFRQWLFADVRTP
EEVNDYAFQKGMCGYELLKRELKHADFVICNYHHVLNADIFSTVLNWLEKESQDVIVIFD
EAHNIESAARSHSSITITEHTIDKAISEIEANLDQMPDGGAHNLFKILLNVIRDTYTSRF
KFGERERVGRNWYDIRISDPYERNDMISGKFLKLAKEAGFGDEPDIQINLSEASAFGAML
DENYKDQYKKGLSKVLKRSHIRYTADFLSSYLVLANNLSYYPILNVKRDVNDEIYGRVEL
FTCIPKNVTEPLFESVFSAILMSATLRPFDMVKSTFGIRRETCEIAYSTSFPLERRLTIA
VSVPPLFAKNRDDPHTSQAIEETIFDAVENTPGNVIIFFQSYFEAKRYYGKLNEQLDIPV
FLDEVGVSSQEVREEFFKIGEQSGKAVLVSYLWGTLSEGIDYRDGRGRTVIVVGVGYPAL
NDRMNAVESAYDHMFSYGAGWDYAVQIPTIRKIRQAMGRVVRSPADYGVRILLDGRFLTD
SPKKFGKFSVFEVFPPEEREEFINVEPEKVKYSLLNFFQDNRT
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatacatacatcattgatgaacaaggaaatcatcctgttcgagggagcctgc
ggtactggcaagaccctcagtgctcttgcaccatccctgcatgtgggcagacaactccaa
aagaccgtgataattgcaaccaatgtgcaccagcagatggtgcagttcattaatgaggcc
cgcgagataaaacaatcaaatgaggtcaaggtggctgtggtcaagggcaagaccagcatg
tgtccaaatggtgtggactacgatgaatgtgccctgaaaagggacaacactttcgaattg
cttgaaacagagcgcgagatagccctgaaaaagcaagagatgaaatctgcgagcgagaat
tacaagcgttcaaaggacctctctttgatagccttgcgtgatgcccttgcaaaagagatg
gacgttgcagaggaaaagatgaaagacctgagggaccggtcctgcaaccacctgtacgaa
gtcctgcgttcagacagtgaatccttcaggcagtggctctttgcggatgtgcgcaccccg
gaagaggtgaacgattacgctttccagaaagggatgtgcggatacgagctgctcaagcgt
gagctaaagcatgctgactttgtgatctgtaactatcaccatgtattgaatgcagatatc
ttctccacggtcctgaactggctggagaaggagtcgcaggatgttatcgtcatctttgac
gaagcccataatatcgagtccgctgcaagatcacactcatcgataaccatcacggaacat
accatcgataaagccatttcggagatcgaggccaatcttgaccagatgcctgacggtggt
gctcacaaccttttcaagatactgctcaatgtgataagggatacgtacacctcacgtttt
aagttcggggagcgtgaacgtgtcggaaggaactggtatgacatacgcataagcgatccc
tatgagcgcaacgacatgataagcggtaagttcctcaagcttgcaaaagaggcggggttt
ggagatgagcccgatatacagatcaacctctcggaagcaagtgcttttggtgctatgctt
gatgagaactataaggaccagtacaagaaaggtctcagcaaggtcctgaagagatcccat
atacgctacacagcggatttcctttcctcataccttgtgctcgcgaacaatctcagctat
tatcccatactcaatgtaaaaagggatgtgaatgatgagatatacggccgtgtggagctt
tttacatgcattcccaaaaacgttaccgagccgctctttgagtcggtgttctcggctata
ctcatgtctgcgacattgcgtccctttgacatggtgaagtcaacctttggcatccgcagg
gaaacctgtgagattgcctacagcacatcttttcctctggaaaggcgcctgacaattgcg
gtatctgttccgcctctttttgcaaagaacagggatgatccgcacacttcccaggcaatt
gaagaaaccatttttgatgcggtggagaacactcccggcaacgtcatcatcttcttccag
agctactttgaggccaagcgttactacggcaaactgaacgagcagctcgatatacccgtt
ttcctcgatgaggtgggtgtctcatcccaggaagtaagggaggaattctttaaaatcggt
gagcagagtggcaaggctgtgctggtgtcatatttgtggggcacgctcagtgaaggcata
gactatcgtgacggcagaggtaggactgtcatagttgtaggtgtgggatatccggctctg
aatgacaggatgaatgctgttgaatcggcatacgaccacatgttcagctatggtgcagga
tgggattatgcggtgcagatacccaccatacgcaaaatacggcaggccatgggaagggtc
gtgcgctcgcccgctgactatggtgtaaggatactgcttgacgggcgttttctgactgat
tctcctaaaaaattcggaaaattctccgtgtttgaggtattcccgcctgaggaaagggaa
gaattcataaatgtggaacctgaaaaagtaaaatactccctgcttaactttttccaggat
aacaggacgtaa
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