Entry |
|
Name |
(GenBank) Rad3-related DNA helicase
|
KO |
|
Organism |
mpy Methanolobus psychrophilus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mpy00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mpsy_1932
09124 Replication and repair
03420 Nucleotide excision repair
Mpsy_1932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mpy03021]
Mpsy_1932
03036 Chromosome and associated proteins [BR:mpy03036]
Mpsy_1932
03400 DNA repair and recombination proteins [BR:mpy03400]
Mpsy_1932
Enzymes [BR:mpy01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mpsy_1932
Transcription machinery [BR:mpy03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mpsy_1932
Chromosome and associated proteins [BR:mpy03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mpsy_1932
DNA repair and recombination proteins [BR:mpy03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mpsy_1932
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1887356..1889467
|
AA seq |
703 aa
MDKIHTSLMNKEIILFEGACGTGKTLSALAPSLHVGRQLQKTVIIATNVHQQMVQFINEA
REIKQSNEVKVAVVKGKTSMCPNGVDYDECALKRDNTFELLETEREIALKKQEMKSASEN
YKRSKDLSLIALRDALAKEMDVAEEKMKDLRDRSCNHLYEVLRSDSESFRQWLFADVRTP
EEVNDYAFQKGMCGYELLKRELKHADFVICNYHHVLNADIFSTVLNWLEKESQDVIVIFD
EAHNIESAARSHSSITITEHTIDKAISEIEANLDQMPDGGAHNLFKILLNVIRDTYTSRF
KFGERERVGRNWYDIRISDPYERNDMISGKFLKLAKEAGFGDEPDIQINLSEASAFGAML
DENYKDQYKKGLSKVLKRSHIRYTADFLSSYLVLANNLSYYPILNVKRDVNDEIYGRVEL
FTCIPKNVTEPLFESVFSAILMSATLRPFDMVKSTFGIRRETCEIAYSTSFPLERRLTIA
VSVPPLFAKNRDDPHTSQAIEETIFDAVENTPGNVIIFFQSYFEAKRYYGKLNEQLDIPV
FLDEVGVSSQEVREEFFKIGEQSGKAVLVSYLWGTLSEGIDYRDGRGRTVIVVGVGYPAL
NDRMNAVESAYDHMFSYGAGWDYAVQIPTIRKIRQAMGRVVRSPADYGVRILLDGRFLTD
SPKKFGKFSVFEVFPPEEREEFINVEPEKVKYSLLNFFQDNRT |
NT seq |
2112 nt +upstreamnt +downstreamnt
atggacaagatacatacatcattgatgaacaaggaaatcatcctgttcgagggagcctgc
ggtactggcaagaccctcagtgctcttgcaccatccctgcatgtgggcagacaactccaa
aagaccgtgataattgcaaccaatgtgcaccagcagatggtgcagttcattaatgaggcc
cgcgagataaaacaatcaaatgaggtcaaggtggctgtggtcaagggcaagaccagcatg
tgtccaaatggtgtggactacgatgaatgtgccctgaaaagggacaacactttcgaattg
cttgaaacagagcgcgagatagccctgaaaaagcaagagatgaaatctgcgagcgagaat
tacaagcgttcaaaggacctctctttgatagccttgcgtgatgcccttgcaaaagagatg
gacgttgcagaggaaaagatgaaagacctgagggaccggtcctgcaaccacctgtacgaa
gtcctgcgttcagacagtgaatccttcaggcagtggctctttgcggatgtgcgcaccccg
gaagaggtgaacgattacgctttccagaaagggatgtgcggatacgagctgctcaagcgt
gagctaaagcatgctgactttgtgatctgtaactatcaccatgtattgaatgcagatatc
ttctccacggtcctgaactggctggagaaggagtcgcaggatgttatcgtcatctttgac
gaagcccataatatcgagtccgctgcaagatcacactcatcgataaccatcacggaacat
accatcgataaagccatttcggagatcgaggccaatcttgaccagatgcctgacggtggt
gctcacaaccttttcaagatactgctcaatgtgataagggatacgtacacctcacgtttt
aagttcggggagcgtgaacgtgtcggaaggaactggtatgacatacgcataagcgatccc
tatgagcgcaacgacatgataagcggtaagttcctcaagcttgcaaaagaggcggggttt
ggagatgagcccgatatacagatcaacctctcggaagcaagtgcttttggtgctatgctt
gatgagaactataaggaccagtacaagaaaggtctcagcaaggtcctgaagagatcccat
atacgctacacagcggatttcctttcctcataccttgtgctcgcgaacaatctcagctat
tatcccatactcaatgtaaaaagggatgtgaatgatgagatatacggccgtgtggagctt
tttacatgcattcccaaaaacgttaccgagccgctctttgagtcggtgttctcggctata
ctcatgtctgcgacattgcgtccctttgacatggtgaagtcaacctttggcatccgcagg
gaaacctgtgagattgcctacagcacatcttttcctctggaaaggcgcctgacaattgcg
gtatctgttccgcctctttttgcaaagaacagggatgatccgcacacttcccaggcaatt
gaagaaaccatttttgatgcggtggagaacactcccggcaacgtcatcatcttcttccag
agctactttgaggccaagcgttactacggcaaactgaacgagcagctcgatatacccgtt
ttcctcgatgaggtgggtgtctcatcccaggaagtaagggaggaattctttaaaatcggt
gagcagagtggcaaggctgtgctggtgtcatatttgtggggcacgctcagtgaaggcata
gactatcgtgacggcagaggtaggactgtcatagttgtaggtgtgggatatccggctctg
aatgacaggatgaatgctgttgaatcggcatacgaccacatgttcagctatggtgcagga
tgggattatgcggtgcagatacccaccatacgcaaaatacggcaggccatgggaagggtc
gtgcgctcgcccgctgactatggtgtaaggatactgcttgacgggcgttttctgactgat
tctcctaaaaaattcggaaaattctccgtgtttgaggtattcccgcctgaggaaagggaa
gaattcataaatgtggaacctgaaaaagtaaaatactccctgcttaactttttccaggat
aacaggacgtaa |