Methanolobus psychrophilus: Mpsy_2448
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Entry
Mpsy_2448 CDS
T02280
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mpy
Methanolobus psychrophilus
Pathway
mpy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mpsy_2448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpy03400
]
Mpsy_2448
DNA repair and recombination proteins [BR:
mpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mpsy_2448
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mpsy_2448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFV24652
LinkDB
All DBs
Position
2356508..2358490
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AA seq
660 aa
AA seq
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MRQFKLVSDYEPKGDQPKAIAQLTEGIRKNMRQQTLLGVTGSGKTFTVANVIQNVQMPTL
VIAHNKTLAAQLYSEFREFFPDNAVEYFVSYYDYYQPEAYIPTTDTYIEKDASINEEIDR
LRLSATRSLLERRDVIVVSSVSCIYNLGSPEEWRKMSVLLTVGDELDRASLFEDLINIQY
ERNDIEFTQGKFRSRGDTIEVYPAQERQGIRIELFGDEIDRIAYFDPVSGKVLHELRPGE
STMIYPAKHFVMSEEHMAGALESIEAELEAELPRLKSQNKLLEAQRLEQRTRFDLEMIRE
LGYCSGIENYSRHFDGRKPGEPPSSLLNFFPEDYMVVIDESHVTIPQVRGMHNGDRARKE
SLISYGFRLPSAYDNRPLRYDEFERQLNYVLYVSATPAEYEIQRSGAVVEQIIRPTGLVD
PEILVRPVENQVDDLISEVRKVTAAGYRTLVTTLTKRMAEDLTDYLVELGIRVRYMHSDI
DTLQRAEIVRDLRKGEFDVLVGINLLREGLDIPEVAFVAILDADKEGFLRSERSLIQTIG
RASRNVNGHVILYADKMTGSMERAISETDRRRKIQVAFNEKHGITPKSIQKALQKELVEH
REYPEGSELMTIAEDLSSVELSDMIIDLESEMHLAARNLEFEKAAELRDKIKELREGYAI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagttcaaacttgtgtccgactacgaaccaaagggtgaccagcccaaagctata
gcccagctgacagagggtatccggaaaaacatgaggcaacagaccttgctgggtgttacg
ggatccggcaagaccttcacagtggcaaatgttatccagaacgtgcagatgcctacactt
gtgatagcacacaacaagacgcttgcagcacaactttattccgagttcagggagttcttt
ccggacaatgctgtggagtattttgtgagttattatgattactaccagcctgaggcctat
atacccactacggatacctatattgaaaaggatgcttccatcaatgaggagatagacagg
ctgcgcctctcagcgacaagatcactgcttgagcgccgtgatgtgatcgttgtatccagt
gtgtcctgtatctacaacctgggttctcccgaagaatggcgtaagatgtcagtcttgctg
accgtgggagatgaacttgacagggcgtccctctttgaggatctaatcaacatacagtat
gagcgcaacgacattgaattcacgcagggtaagttccgctccaggggggacactattgaa
gtatatcccgctcaggagcgccagggtatccgtatcgaactctttggtgatgagattgac
cgcatagcttactttgatcctgttagcgggaaagtgctccatgaactaaggccgggcgag
agtaccatgatttatcctgccaagcacttcgtcatgtccgaggagcacatggccggtgcg
ctggaatcaatcgaggctgagcttgaggctgaattgccccggctcaagtcccagaacaag
ctgcttgaagcacaaaggcttgagcagcgcaccaggtttgacctggaaatgatacgggaa
ctcggatactgcagtggtatagagaactactcacgtcactttgacggaagaaaacccgga
gagcccccttcttccctgttgaatttcttcccggaagattacatggtcgtcattgatgaa
tcccatgtcaccatcccgcaggtaaggggtatgcacaacggtgaccgcgcaaggaaggag
tctctcatttcctacggcttccgtctgccttctgcgtatgataaccgtcccctgcgatat
gacgagttcgaaaggcagcttaactatgtcctttacgtatccgccacacctgccgaatat
gagattcagagaagcggcgccgttgtggagcagatcatccgtccgacgggccttgttgat
ccggaaatccttgtacggcctgttgagaatcaggtagatgaccttataagtgaggtgcgc
aaagtgactgccgcaggctatcggacacttgtgacgactctcacgaaaaggatggctgaa
gaccttaccgattatcttgtagaactgggcatcagggtgcggtacatgcattcggatatc
gatactctccagagggctgaaatagtccgtgaccttcgaaagggtgagttcgatgtgctt
gtaggcataaacctgttgcgtgaggggctggatattccggaggtggccttcgttgcaatt
cttgatgccgataaggaaggtttcctgcgctcggaacgctctcttattcagaccatcggg
cgtgcatcaaggaacgtgaacggccatgtgatactgtatgccgacaagatgacaggttcc
atggagcgtgcaataagtgagaccgacaggcgccgcaagatccaggtggcattcaatgag
aagcacggtatcacgccgaaatccattcagaaggccctgcagaaagagctggtggagcac
agggaatatcccgagggttccgaactcatgacgattgcagaagacctatcttcagtggag
ctctcggatatgataatagaccttgagtccgaaatgcacctggctgccaggaaccttgag
ttcgaaaaagcagccgagcttcgcgacaagataaaagaactgcgtgagggctatgcgata
tga
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