Methanolobus psychrophilus: Mpsy_2748
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Entry
Mpsy_2748 CDS
T02280
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mpy
Methanolobus psychrophilus
Pathway
mpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpsy_2748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpy03019
]
Mpsy_2748
Enzymes [BR:
mpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mpsy_2748
Messenger RNA biogenesis [BR:
mpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mpsy_2748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
P-loop_SecA
Cas3-like_C_2
AAA_19
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFV24949
LinkDB
All DBs
Position
2627582..2628808
Genome browser
AA seq
408 aa
AA seq
DB search
MLFKDLNLIDPLQRALTKEGYIEPTPIQVQSIPQLLKGKDLIGIAQTGTGKTAAFVLPIL
QRMHEKHKHTTPGFPRVLVLAPTRELAAQIGDSFAAYGHFLHFKHTVVFGGVSQVPQFKS
ITKGVDILVATPGRLLDLMDQGIVKLSGVEFFVLDEADRMLDMGFIKDVNRIVSMLPHKR
QSLFFSATMSPQISELTRRLLTDPVRVEVTPQATTVERIEQKVFFVDQENKDALLLSLLQ
QDHLNCVLVFTRTKHRANKVAQTLNKNRVGADAIHGNKSQAHRTRVMESFRAGELQVLVA
TDIAARGIDIEDISHVINYDLPNEPESYVHRIGRTARAGAEGTAYSFCAADERSFLRSIE
KLTRLEIDVMRHRYHSQRAQDAVGEEAKPAPRKPRAPPRRPGHGTHKR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgttattcaaagacctaaatcttatagacccgcttcaaagggcccttactaaagaaggc
tatatagagccgactcccattcaggtacagtccatacctcaactgctcaagggaaaagat
ctcataggcattgcccagacaggtacaggcaaaactgccgcctttgtgctgcctatactt
caaaggatgcacgaaaagcacaagcatacgactccgggatttcccagggtgcttgtgctt
gcacctacaagagaacttgctgcgcagatcggtgacagttttgccgcatacggtcatttc
ctgcatttcaagcacacagtcgtatttggcggcgtaagtcaggtaccgcagttcaagagt
atcacaaagggcgtggatatattagtggccactccgggaaggctgcttgacctgatggac
cagggtattgtcaagctcagcggtgtcgagttctttgttctagacgaggctgacaggatg
cttgatatgggattcatcaaggatgtcaaccggatcgtatcgatgctgcctcacaagcgc
cagtcgctcttcttctcggctaccatgtctcctcagataagcgagcttactaggaggctt
ctgacagaccctgtgcgtgttgaggtgactcctcaggcaacgactgtggaacgtatagag
cagaaggtctttttcgtggaccaggaaaataaggatgctcttctcttgagtcttctccag
caggatcacctgaactgcgtactggtgttcacccgcacaaagcacagggcgaacaaggtg
gcacaaacgcttaacaagaaccgtgtgggtgctgatgctattcatggtaacaaatcgcag
gcccatcgtacccgggtgatggagagtttcagggccggagaacttcaggtgctggtagcg
accgatatcgcagcacgaggcatcgatattgaggacatatcccacgttataaattatgac
ttgcccaacgaacctgagagctatgtgcatagaatagggcgtacggcgcgggcaggagca
gagggaacggcatattccttctgtgcggcggatgaacgcagtttccttcgcagtattgaa
aagctcacaaggctggaaatagatgtaatgaggcaccgctatcattcacagcgggcgcag
gatgcagtgggtgaagaggcaaagccggctcctagaaagccgcgtgctcctccaagaagg
ccggggcacggcacccataaacgatag
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