Methanolobus psychrophilus: Mpsy_3041
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Entry
Mpsy_3041 CDS
T02280
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpy
Methanolobus psychrophilus
Pathway
mpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpsy_3041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpy03019
]
Mpsy_3041
03009 Ribosome biogenesis [BR:
mpy03009
]
Mpsy_3041
Enzymes [BR:
mpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mpsy_3041
Messenger RNA biogenesis [BR:
mpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mpsy_3041
Ribosome biogenesis [BR:
mpy03009
]
Prokaryotic type
rRNA helicases
Mpsy_3041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
AAA_19
NAT10_TcmA_helicase
CMS1
UTP25_NTPase-like
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFV25240
LinkDB
All DBs
Position
2919995..2921290
Genome browser
AA seq
431 aa
AA seq
DB search
MESITFSQLNLSQSIINAIKDIGYEEPTPIQAQAIPLIMEGKDVIGQAQTGTGKTAAFGI
PALELVDPEFNDVQVLVLCPTRELANQVADELTKLSAYQKLRILPIYGGQSLDRQIKALR
RGVHIIIGTPGRVMDHIERKTLNLENVAMVVLDEADEMLDMGFREDIELILTKVPDDRQT
ILFSATMPALIMKLTKRFQRDPQLVKTIHKKVTVPNVEQSYFEVKFHTKPEVLCRLIDIY
DVKSSLVFCNTKRAVDELVDTLKTRGYLADGLHGDMKQQQRERVMASFRKGDIETLVATD
VAARGIDVENIEVVFNFDLPQDEESYVHRIGRTGRAGRQGRAFTFVTGRELYKIKSIQKY
TNVKILSQKVPTRSDAEEIKANMLAQKVKDTIDSGHMGKYVNWVERMTEEEYTSVDVAAA
LVKMMLAEDNK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaatctataacatttagtcaacttaatctttcacaaagtattataaatgccatcaag
gatatcggttatgaagagccgactcccatccaggcgcaggcaatcccattaataatggaa
ggcaaggatgtgatcggacaggcacagacagggactggcaagacagcagcctttggtatc
cctgcccttgagctggtagatccggaattcaatgatgtacaggtcctcgtgctctgcccg
acacgagaactggcaaaccaggttgcagacgagctgaccaaactctcagcttaccagaag
cttcgaatactgcctatatatggcggacagagtctggacagacagatcaaggctctgcga
agaggggtccacatcatcatagggacgcccggaagggtcatggaccacatagagcgcaag
acactgaaccttgagaacgtagcaatggtagttctcgatgaggcagatgagatgcttgac
atgggtttcagggaggacattgagcttatcctgacaaaggtgccggatgacaggcagacc
atcctgttctcagcaaccatgcctgctcttataatgaaactgacaaaaaggttccaaagg
gacccccagcttgtcaaaaccattcacaagaaagtcacagtccccaacgtggaacagtct
tactttgaagtgaagttccatacaaaaccggaggtactctgcaggctcatcgatatctat
gatgtcaaatcatccctggttttctgtaatacaaaaagagctgttgacgaactggttgat
actcttaagacaagaggatacctggcagacggcctgcatggtgatatgaagcagcagcag
agagaaagagttatggccagcttcaggaaaggggacatagagactcttgttgccaccgac
gtggcagcccgtggaatagatgtggagaacatagaggttgttttcaattttgacctgccc
caagatgaggaatcatatgtccaccgcataggaaggaccggcagggcaggaagacaggga
cgtgcattcacatttgttaccggcagggagctttacaagatcaaaagtatccagaagtac
accaatgtgaagatactcagccagaaagtgccaacaagaagcgatgccgaggaaatcaag
gctaatatgctggcacagaaggtcaaagatacaattgattcgggccacatgggcaaatat
gtaaactgggtcgagaggatgacagaagaagagtacacatctgtggatgttgccgcagca
cttgtgaagatgatgcttgctgaagataacaagtga
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