Marinitoga piezophila: Marpi_0852
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Entry
Marpi_0852 CDS
T01665
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpz
Marinitoga piezophila
Pathway
mpz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Marpi_0852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpz03021
]
Marpi_0852
03400 DNA repair and recombination proteins [BR:
mpz03400
]
Marpi_0852
Enzymes [BR:
mpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Marpi_0852
Transcription machinery [BR:
mpz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Marpi_0852
DNA repair and recombination proteins [BR:
mpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Marpi_0852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEX85268
UniProt:
H2J776
LinkDB
All DBs
Position
complement(861656..862705)
Genome browser
AA seq
349 aa
AA seq
DB search
MEFVKPEKMILETLEESEELEYKYGRFVLSPLERGYAVTIGNALRRVLLSSIPGLAITSI
RIPGKLHEFDVIEGVQEDILEITVNLKKVELKVVDFDNIGNLKEPIVLRIEKMGPAEIKA
GDIITPPGIEIANPDFKIATMNANKKFEMELYATVGKGFVSTSEMDLSKDIEMIYIDGVY
SPVIRVNYLTEKVRVGKRTDYDKLILEVWTKKSIDPKEALVKATKILIEHFNIIYSSWRE
EIDLTEAEAIPESMETNVSEEIAGQEVEEEFKNVSLEVLETRIDELDLSKRAKNCLKREK
INTVRDILKKDPDELMKIKNFGKKSLDEIRKELKEKFQLDYDEIQKGGA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgtaaaaccggaaaagatgatattagaaacattagaagaatcagaagaatta
gaatacaaatatggaagatttgtcctgtcgcctcttgaaagaggatatgcggttaccata
ggtaacgcattaagaagagtattattatcctcaataccagggcttgcaataacaagcata
agaattcctggtaaattacacgaatttgatgtaattgaaggcgtacaggaagatatactt
gaaataacagttaaccttaaaaaagttgaattaaaagttgtagattttgataacattgga
aatttaaaagaaccaatagttttaagaatagaaaaaatgggaccagcagaaattaaagca
ggagacataattacaccaccaggtattgaaattgcaaatcctgattttaaaattgcaaca
atgaatgcaaacaaaaaatttgaaatggaattatatgcaacagtaggaaaaggatttgta
tcaacatcagaaatggatctttcaaaggacattgaaatgatttatatagatggtgtatat
agtcctgtaattagagttaattatctcacagaaaaagttcgtgttggaaaaagaacagac
tatgataaattaatacttgaagtatggacaaaaaaatctatagatccgaaagaagcattg
gtaaaagccacaaaaatattaattgaacactttaatataatctactcatcatggagagaa
gagatagatttaacagaagctgaagctattccagaatcaatggaaacaaatgtttcagaa
gaaattgctggtcaggaagtagaagaagaatttaaaaatgtaagtcttgaagttcttgaa
acaagaatagacgagctcgatttaagcaaaagagcaaaaaattgtttaaagagagaaaaa
atcaatacagtaagagacatattaaagaaggatccagatgaattaatgaaaatcaaaaac
ttcggtaaaaaatctttagatgaaattagaaaggaattaaaagagaaattccagttggat
tatgacgagatccagaagggaggagcctaa
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