Marinitoga piezophila: Marpi_0946
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Entry
Marpi_0946 CDS
T01665
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mpz
Marinitoga piezophila
Pathway
mpz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Marpi_0946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpz03400
]
Marpi_0946
Enzymes [BR:
mpz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Marpi_0946
DNA repair and recombination proteins [BR:
mpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Marpi_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEX85358
UniProt:
H2J7L7
LinkDB
All DBs
Position
complement(942674..943342)
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AA seq
222 aa
AA seq
DB search
MGKMEDMDIISEKIKKCKGCSLSLSRNNVVVGEGSLDTPIMFVGEGPGANEDLQGRPFVG
RAGNLLDKLLKEVAKINREDLYITNVVKCRPPKNRVPTGEEMEKCSHFLLAQVMTIKPKI
IVALGSTALNYFLKQTVPITKHRGRFKEWYGDIYIFPTFHPSYLLRNRSEKEGSPLFYAK
IDMQAIGYMYKQLKNNPDLDIKKLVTTVEKGVIAAENKINKG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatggaagatatggatataattagcgaaaaaataaaaaaatgtaaagggtgt
tctttaagtttatcaagaaataatgtagtagtaggtgaagggagtttagatacacctata
atgtttgttggtgaaggtcctggtgcaaatgaagatttacagggaagaccatttgtagga
agagcagggaatttacttgataaattgttaaaagaagtggcaaagataaatagagaagat
ttatatattaccaatgtggtaaaatgtaggccgcctaaaaacagagtgcccacaggcgaa
gaaatggaaaaatgcagtcattttctccttgcgcaggttatgacaataaaaccaaaaatt
atagttgcgttaggttctacagcattaaattattttttgaagcaaacagttcccattaca
aaacatagaggaagattcaaagaatggtatggcgatatatatatattcccaacatttcac
ccaagctatcttcttagaaataggagtgaaaaagaaggatctccattgttttatgcaaaa
attgatatgcaggcgataggttatatgtacaaacagttgaaaaataatccagatttagat
ataaaaaagctggtaacaacggttgaaaaaggcgtaattgcagcagaaaataaaataaac
aaaggatga
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