Marinitoga piezophila: Marpi_1060
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Entry
Marpi_1060 CDS
T01665
Name
(GenBank) putative domain HDIG-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mpz
Marinitoga piezophila
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpz03019
]
Marpi_1060
Messenger RNA biogenesis [BR:
mpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Marpi_1060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AEX85472
UniProt:
H2J7Y1
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All DBs
Position
1083432..1084472
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AA seq
346 aa
AA seq
DB search
MKNTGGISLGDMLKEKGQLSDDIINTSYISDLKVNDVKDVEGKVLSKRLQTTKDGKEFLL
FTLGDKTGTLRAIDWFNASKNNEKINIGDIIRLRGKIVVFDSRLQLNVDKDSEIKILKED
EIDPEKFIKSSSKDVEYLKNELYAIIDSIKDIDIKNLLTYMFIKDKKFIKQFFDSPAAIS
VHHAYKHGLLEHTVDVAKLCISISENYIDIVQKDILIAGALLHDIGKIREYKITPAGIEK
TDEGELIGHIALGTNMVIEAAKKVNNMPSEKLEQILHMIVSHHGELEWGSPIVPKTIEAF
ILHFADNLSSKVEQVRNHIEESNNKDWTDYNKNLGRKIKITKLEDK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacactggcggtataagtttaggagatatgttaaaagaaaaagggcaattatca
gacgatattataaacacttcatatatttcagatttaaaggttaatgatgtaaaagatgtt
gaaggaaaggttttaagcaaacgccttcaaacaacaaaggatggaaaggaatttttgctt
tttactctgggagataaaacaggaacattaagagctattgattggttcaatgcctcaaaa
aacaatgaaaaaataaatattggagacattatcagattaagaggtaaaatagttgtattt
gatagtagattgcaattaaatgttgataaagacagtgaaataaaaatcttaaaagaagac
gaaatagaccctgaaaagtttatcaagagcagctctaaagatgtggaatacctaaaaaat
gaattatatgcaattattgattccattaaggatatagatatcaaaaacctgctgacatat
atgtttatcaaggataaaaaattcattaagcaattttttgattcacctgcagctattagc
gttcatcatgcgtataaacacggattacttgaacacacagtagatgtcgcaaaattatgt
atttcaatctctgaaaattatatagatattgtccagaaggacattcttattgcaggagcg
ttattacatgatattggaaaaataagagaatacaaaataacccctgctggtatagagaaa
acagatgaaggcgagttaataggacatattgcactgggaacaaatatggttatagaagct
gcaaaaaaagttaacaatatgccttctgaaaaacttgaacagatactacatatgattgtt
tcacatcatggagaactcgaatggggtagtccaatagttcccaaaacaatagaagcattt
atattacattttgctgataatttaagttctaaagtagagcaggttagaaatcatattgaa
gaatccaataacaaagattggacagattataacaaaaatcttggccgaaagataaaaata
acaaaattggaggacaaataa
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