Marinitoga piezophila: Marpi_1061
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Entry
Marpi_1061 CDS
T01665
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpz
Marinitoga piezophila
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpz03032
]
Marpi_1061
03400 DNA repair and recombination proteins [BR:
mpz03400
]
Marpi_1061
Enzymes [BR:
mpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Marpi_1061
DNA replication proteins [BR:
mpz03032
]
Prokaryotic type
DNA Topoisomerases
Marpi_1061
DNA repair and recombination proteins [BR:
mpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Marpi_1061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_C_rpt
DUF7129
DUF7351
HypA
Zn_ribbon_8
Lar_restr_allev
DNA_ligase_ZBD
Zn_ribbon_TFIIB
Zn_ribbon_6
DZR
zinc_ribbon_6
DUF7130
DUF1451
Trm112p
Zn_ribbon_IS1595
Zn_ribbon_RPB9
Zn_ribbon_PaaD
zf-C2HC5
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AEX85473
UniProt:
H2J7Y2
LinkDB
All DBs
Position
1084473..1086716
Genome browser
AA seq
747 aa
AA seq
DB search
MPKTAKKIVIVESPAKAKTIEKYLGSEYKVVASKGHIRDLPQKKFGVDIEKDFEPEFELM
PGKEKVVEDLKKIAKGKTVYLAPDMDREGEAIAWHLSYLLGLDENEENRIIFSEITKNTI
QEAIKSPRKIDKNKVGAQLARRILDRIVGYKISPILWRILKDYNTSAGRVQSAALKILVD
RERQIFKFKPKEFYKIFLKYMEQDIPLVKIDGKKFKKESISEKKKEEIFKELENAIYSVT
AVTEKETKKNPPQPFITSTLQQSAISKYGWSSQKTMQIAQKLYEGIETKEGPIAFITYMR
TDSTRISEDAMKKAHEYLESNFGKEYTGHFKVKKSKKKIQDAHEAIRPTDVFMDPKKAKE
LISGDALKLYTLIWNRFMASQSAPSKYIEKTYTISDNNKKYEFEAVGRKRIFDGFEKFWS
SSTTEKEYEIPEKGILENIELKAERDETKPPSRYTEASLVKEMESKGIGRPSTYATIITT
LLNRKYVIKEKNSLIPTLVGFVVSDILEMNFPEIVDVKFTAHMEENLDKVESGEMDWKTL
LKEFYAEFEKFLNDTDKKLKERSMDFTYNTDISCEKCGEKMQLQFGRYGLYLKCPKCGEN
KGIQKGALGVTIDKKVYLDESFLKTEKGKEEGIGRQCPKCGGELVIKSGRFGKFIACSNY
PECKYTEPLPARGKCPKCGGTVHKMKSKKGKVYYKCSECGEMFWDEPSDYRCPSCNGPLF
YKRKNREEMLYCPEEKKYFKESEINEL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaactgcaaaaaaaatagtaatagtggaatcaccagccaaagcaaaaacaata
gaaaaatatcttggctcagaatacaaagtagtggcatccaaaggacatattagagatttg
ccacagaaaaaatttggtgttgatattgaaaaggatttcgaaccggaatttgaactcatg
cctggtaaagaaaaggttgtagaggatcttaaaaaaatagcaaaaggtaaaacagtctat
cttgcacctgatatggatagagaaggagaagctattgcctggcatttgagttatttactc
ggacttgatgaaaatgaagaaaatagaataatcttttcagaaattaccaaaaacaccatt
caggaagccataaaatcaccaagaaaaatagataaaaataaagttggtgctcaattagca
aggagaattcttgataggatagttggttataaaataagtcctattttatggagaatttta
aaggattataataccagtgccggtagagtacaatctgccgctttaaagatacttgttgac
agagaaagacagatatttaagtttaaaccaaaagaattttataagatatttttaaagtat
atggaacaggatataccactggtaaaaatagatggaaaaaaatttaaaaaagaaagtatt
tcagaaaagaaaaaagaagaaatattcaaagaactggaaaacgctatttactctgttact
gcggttacagaaaaggaaacaaagaaaaatccccctcaaccatttataaccagtacatta
caacaaagcgcaatttcaaaatatggctggtcatcacaaaaaacaatgcaaatagctcaa
aaactatacgaaggtattgaaacaaaagaaggccctattgcctttatcacatatatgaga
acagattcaacaagaatctcagaagacgctatgaaaaaagctcacgaatatctcgaatca
aattttggaaaagagtatacaggtcattttaaggttaaaaagtcaaagaaaaagattcag
gatgctcacgaagctataagaccaacagatgtatttatggatcctaaaaaagcaaaagaa
cttatctctggcgatgctttaaaattatatacattaatctggaataggtttatggcttca
caatcagctccttcaaaatatattgaaaaaacatatacaataagcgataacaataaaaaa
tatgaatttgaagctgttggaagaaaaagaatatttgatggatttgaaaaattctggagt
tcaagcacaactgaaaaagaatatgaaataccggaaaagggtatattagaaaatattgaa
ttaaaggcagaaagagatgaaaccaagccaccttcaagatatacagaagcttcattggta
aaagaaatggaaagtaagggaattggaaggccttctacatatgcaactataatcactaca
ttattaaatagaaaatatgtaataaaagaaaaaaattcattaataccaacacttgttgga
tttgtagtttcagatatactcgaaatgaactttccggaaattgttgacgttaaatttacc
gcccatatggaagagaacctggataaagttgaatctggagaaatggattggaaaaccctt
ttaaaggaattttatgcagaatttgaaaaattccttaatgatacagataaaaaattaaaa
gagcgttctatggactttacatataatacagatatttcatgtgaaaaatgcggtgaaaag
atgcaactccaatttggacgttacggattatacttaaaatgtccaaaatgcggtgaaaac
aaaggcattcaaaaaggcgccttaggtgttaccattgataaaaaggtatatttagatgaa
tcatttttaaaaacagaaaaaggaaaagaggaaggaataggcagacaatgtccaaaatgt
ggcggtgaattggtaataaaaagcggaagatttggaaagtttatagcctgttcaaattat
ccagaatgcaaatatactgaaccattaccggcaagaggtaaatgtccaaaatgtggcggt
accgttcataaaatgaaaagcaaaaaggggaaagtatattataaatgttcagaatgtggt
gaaatgttctgggatgaaccttccgattatagatgtccttcatgtaacggacctttattc
tataaaagaaaaaacagagaagaaatgctctattgtccagaagaaaagaaatactttaaa
gaaagtgagataaatgaactataa
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