Marinitoga piezophila: Marpi_1673
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Entry
Marpi_1673 CDS
T01665
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpz
Marinitoga piezophila
Pathway
mpz03420
Nucleotide excision repair
mpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Marpi_1673
03430 Mismatch repair
Marpi_1673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpz03400
]
Marpi_1673
Enzymes [BR:
mpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Marpi_1673
DNA repair and recombination proteins [BR:
mpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Marpi_1673
MMR (mismatch excision repair)
Other MMR factors
Marpi_1673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
ResIII
DEAD
Terminase_6N
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEX86062
UniProt:
H2J545
LinkDB
All DBs
Position
1736808..1738784
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AA seq
658 aa
AA seq
DB search
MDEKVFNIKREYSIPEFFKEELDSEQLDAVINSTGRSLIIAGPGSGKTRVITYKIAYLLS
QGIKPENILLVTFTRAAAREMVERVRNVTNVDTSSLTAGTFHHVCNMILRRYAKVIGYEN
NFTILDSEDAKDLMRIAKNEYKETLTKEEAKQIPGEGVILKIIGYAANTLKSIREAILDM
AAYLIDYQEDIERIYMNYLEMKKKINAMDYDDMLINTLHLLETNEDIRNYIASKYQWVLV
DEFQDTSLVQLRIVEFLSSVHKNLIVVGDDSQSIYSFRGSRFENVEEFQSHEDVKLFKIQ
TNYRSVPEIVELENYLIPTHSIPKKLKPYRSSYHMKPVIVKTYDELEQADFIVQLIENKF
DEGVSPEEIAILYRSHSLSMVLQQKLDVKKISYKLLSGKRFIETRHIKDIMAFLKILANP
YDNISWTRVLKLFPGIGQKTLTKIVNEFYANLMEYPTPYGAFEQIKFRKYPKAKEIILYL
FENSDENPQDLIDYIYNEFYREYLELNFKDAYSRKQDIERLGEIASRYKSVESFLEELAL
SENIEIQSAEKDRKNERITLTTVHGAKGLEWKVVIIISVNPGDFPNGMALKEKKIDEEER
LFYVAVTRAKDELYIVKQLTGTTKPYYGNSFYMRQKLPDFTDKIPKELVEHWKIGYSD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaaagtgtttaatataaaacgtgaatattctataccagaattcttcaaagaa
gagttagatagtgaacagcttgatgccgttataaactccacaggaagatcattaataatt
gcaggcccgggttcaggaaagacccgggtcattacatataaaatcgcatatttgctttct
caaggcataaaaccggaaaatattttattggttacttttacaagagctgctgctcgtgaa
atggtagaaagggtaagaaatgtaaccaatgtagatacatcttcactaactgcaggtacc
tttcaccatgtgtgtaatatgattttaaggagatatgcaaaggttattggatatgaaaat
aactttactattctcgattcagaagatgcgaaggatttaatgagaatagcaaaaaatgaa
tataaggaaacattaacaaaggaagaagccaaacaaattccaggtgaaggggttatttta
aagattataggatatgccgcaaatacgttaaaatccattcgtgaagcaatattggatatg
gctgcatatttaattgattatcaagaggatatagaaagaatatatatgaattatcttgaa
atgaagaaaaaaataaatgcaatggattatgatgatatgctaataaatacattgcatctt
ttagaaacaaatgaggatataagaaattatatagcttcaaaatatcaatgggtattggta
gatgaatttcaggataccagtcttgttcaattgagaatagttgaatttttatccagtgtg
cataaaaatcttatagttgttggtgatgattcgcaaagtatatattcatttaggggttca
agatttgaaaatgttgaagagtttcagtcacatgaagatgtaaaattatttaaaattcaa
acaaattatagaagtgttcctgaaatagttgaattagaaaattatcttattccaacacac
tctattccaaaaaaattaaaaccatatagaagttcctatcatatgaaaccagtaatagtg
aaaacatatgatgaattagaacaggcagattttatagtgcaacttatagaaaataaattt
gatgaaggtgtttctccagaagaaatagctatattataccgttcccatagtttatcaatg
gtactacaacaaaaattggacgtaaaaaagatttcatataaattattatctggtaagaga
tttatagaaacaagacatataaaagatataatggcttttttaaagatattagcaaatcca
tatgataatatttcatggacacgtgtattaaagctgtttccaggtataggtcaaaaaaca
cttacaaaaatcgttaacgaattttatgcaaaccttatggaatatccaacaccatatgga
gcatttgaacagattaaatttagaaagtatccaaaagccaaagaaataatattatatttg
tttgaaaatagcgatgaaaatccacaggatttaatagactatatatataatgagttttat
agggaatatctggaattaaattttaaagatgcatattcaagaaaacaggatatagaaaga
ttaggggaaattgcttcaagatataagtcagtagaatcctttcttgaagaattggcatta
agtgaaaatatagaaatacaaagtgccgagaaagatagaaaaaatgaaagaattacatta
actacagttcatggtgcaaagggattggaatggaaggttgtaataataatttctgtaaac
cctggagatttcccaaacggaatggcattaaaagaaaaaaagatagatgaagaggaaaga
ttgttttatgttgctgtaactcgagcaaaagatgagttgtatatagtaaaacagcttact
ggaacgacaaagccgtattacggcaattcattttacatgaggcagaaattaccagatttt
acagataaaattccaaaagaacttgtggaacactggaaaattggatattcagattaa
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