Marinitoga piezophila: Marpi_1720
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Entry
Marpi_1720 CDS
T01665
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit/160 kD subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpz
Marinitoga piezophila
Pathway
mpz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Marpi_1720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpz03021
]
Marpi_1720
03400 DNA repair and recombination proteins [BR:
mpz03400
]
Marpi_1720
Enzymes [BR:
mpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Marpi_1720
Transcription machinery [BR:
mpz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Marpi_1720
DNA repair and recombination proteins [BR:
mpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Marpi_1720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AEX86106
UniProt:
H2J5G2
LinkDB
All DBs
Position
1789194..1793930
Genome browser
AA seq
1578 aa
AA seq
DB search
MGKMTSSFKRKIAKIKVGIASPERIREWSFGEVKKPETINHRTFKPERDGLFCEKIFGPV
KDYECNCGRYKGKKYEGTVCEKCGVRVESKEARRRKMGHIELAAPVVHIWFLKSSPSILS
ILLNIPVKELENIIYYGSKRVVEKIWLITDPKDTDMFDYGDLLHNTEYEIFKEKMDFDVE
QAVKVLHVKEKPVAKRSGVVSIETELTQTKHEITWVKIKDENGVEEKWPIFEGATLYVED
GEEVEEGTQLADTFLYEEEILTASEYLIFEQFYPSAIEIERDIERDTPILVITEIDPEIQ
EEIGKGIGSTLLQEEYEAYKELYHDRITADYGGEAIKKLLRSLDLHELKIQLESELSKLD
KKSAKALKLLKRLKVVKDFLKSGNKPEWMIIEALPVVPPDIRPLIQIDGGRFAATDLNDL
YRRVINRNNRLQKLFEIEAPEIIVRNEKRILQQAVDSLIYNGRVGKAMTDRSGRPLRSLT
DLIKGKKGRFRRNLLGKRVDYSGRAVIVVGPELKIHECGLPKKMAMELFKPFVLNKLLKD
SNASSKNARKLKKTIIEKEMPEAWEMLEEVIKGHPVLLNRAPTLHRISIQAFIPRLIEGN
SIQLHPLVCPPFNADFDGDQMAVHVPLSNIAQAEAKFLMLSRYNIISPANGKPISMPGKD
MIAGAYYLTTVDPKYFESRKLPSNIKDFENKDTIKYLFNDELHALYVHEYEKVIKNEIVV
EDNELRWEKPTLILHEPIGLYLDGKLIKTTVGRLIFKEILPEPIGRFNPDFNKIYKKKEI
KNLIFDTFKYHGIDRTADLLDDIKFLGFHYATLSGLTISVRDIVEPKERIEIIKKSEQIV
MEIEKYYEEGYLTDDQRYKEVVKVWEKTIADVTEVTSKEFRKYPFNPVWMMVDSGARGNI
DQLKQLAGMRGLMADPSGKVIELPIKSNFRNGLSELEFFISTHGARKGSADTALRTSTAG
YLTRRLVDVAQSITVTEPDCGTSKGIEARELIADGLRIEKLADYLFGRVLASDVVDPVTD
EIIVNPTTGKKYVKDVMLDEEDAEFLANYRSTIPVYEVHEKLSVDKINLYLYNILNSDVL
VDGELLYAKGTVIDNDIIVSLKQHNIKEVDVKEYKVVNFVHVGDAIKVEDENGKIITLAN
YQEKIDADTARKLERYNIETIEVRPSIYVRSILTCEAEHGVCAKCYGMDLSNHKIVNIGE
SVGIIAAQSIGEPGTQLTMRTFHTGGIATAGDITQGLPRAEELFEARKNLKGPEAEFSTV
KGIVRKVNRDEKGRLVIIVEDLKGELYTYIADPKVKPTVNEGDKVEPGYRLTSGNIKPRR
LLEELGAEVTFDYLLKEIKKIYAEQGVEIHDKHFEIIIKQMFNKVEITYAGDTDFMPKDL
VNLKTVEKVNKQIYEANKKVEENREMAIGKKLAEKIIVKVDEENETIGEIGDTVTEELLN
RIIAAGIKEIEVFKSEPQLLENEDEEIRLVGEKETLLIAPKEPARYERKLLRITKSSLER
EGWLGAASFQQTVQVLTEAALEGREDYLLGLKENVIVGQPIPAGTGLKAFLESEISIFEL
PTYPTEDTKTDESESAAS
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaatgacttcttctttcaaaaggaaaatcgcaaaaataaaggtaggtatagct
tcaccagaaagaattagagaatggtcatttggtgaagtaaaaaaaccagaaactattaat
cacagaacatttaaaccagaaagagatggacttttctgtgaaaaaatatttggtcctgta
aaggattacgaatgtaactgtggaagatataaaggtaaaaagtatgaaggtacagtatgt
gaaaagtgtggagttagagtagagtcaaaagaagccagaagaagaaaaatggggcatatt
gaattagctgcccctgtagtacatatctggttcttaaaatcatctccatctattttatca
atattattaaatatacctgtaaaagaattggaaaacataatctactacggatcaaaaagg
gtagtagaaaaaatatggcttattacagatccaaaagacacagatatgttcgattatgga
gatcttctccataatacagagtatgaaatatttaaagaaaaaatggattttgatgttgaa
caggcagtaaaagtattacatgtaaaagaaaaacctgttgctaaaagatccggggtagta
agcattgaaacagaacttacacagacaaaacatgaaatcacatgggttaaaataaaagat
gaaaacggtgtagaagaaaaatggccaatctttgaaggtgcaacattatacgtagaagat
ggtgaagaagtagaagaaggaacacaacttgcagatacattcttatatgaagaagaaata
ttaacagcaagcgaatatttaatatttgaacaattctatccatcagcaatagaaatagaa
agagatatagaaagagatacacctatacttgtaattacagaaattgatcctgaaattcag
gaagaaattggaaaaggtataggtagcacattattacaggaagaatatgaagcatataaa
gagttatatcatgacagaataacagctgattatggtggagaagcaataaagaagcttctt
agaagtttagatttacatgaattaaagattcagcttgaatcagagttatcaaaattagac
aagaaaagcgcaaaagctttaaaattattaaaaagattaaaggttgtaaaagacttctta
aaatcaggtaataaacctgaatggatgattatagaagcattgccagtagttccgccagat
atcagaccattaattcaaatagatggtggaagatttgcagctacagacttaaacgactta
tacagaagagttatcaatagaaataacagattacaaaaattatttgaaatagaagcacca
gaaataattgttagaaatgaaaagagaattctccagcaggcagtagattcattaatctac
aatggccgtgttggaaaagctatgacagatagaagtggaaggcctttaagatcattgaca
gatttaattaaaggtaaaaaaggaagattcagaagaaatcttcttggaaaacgtgtggat
tactcaggaagggctgttattgttgttggtcctgaattaaaaatccatgaatgtggtctt
ccaaagaaaatggcaatggaattattcaagccgtttgttctcaataaattacttaaagat
tcaaatgcatcaagtaaaaacgcaagaaaattaaagaaaacaattattgaaaaggaaatg
ccagaagcatgggaaatgcttgaagaagtaataaaaggtcatcctgtattattaaacagg
gcacctacattgcatagaatttcaattcaggcatttatcccaagattaattgaaggtaat
tcaatacagttacatccattggtatgtcctccatttaacgcagactttgacggagaccag
atggctgtacacgtaccgctttcaaatatagctcaagctgaagctaaattcttgatgtta
tcaagatacaatatcatatcacctgcaaatggaaaaccaatatccatgccaggtaaagat
atgatagctggtgcatattaccttacaacagttgatccaaaatactttgaatcaagaaaa
ttaccttcaaatataaaagactttgaaaataaagacacaataaaatatttatttaatgat
gaattacacgcattatacgttcatgaatatgaaaaggtaataaaaaatgaaatagttgtt
gaagataatgaattgagatgggaaaaaccaacactcatactccatgaaccaattggattg
tatcttgacggaaaattaatcaagacaacagttggaagattgatcttcaaggaaatattg
ccagaaccaattggaagatttaatccagatttcaacaaaatatacaagaaaaaagaaatc
aaaaatcttatattcgatacatttaaataccatggaattgacagaacagcagacttgctt
gatgatattaaattcttaggattccactatgcaacattatcaggattaacaatatctgta
agggatatagtagaaccaaaagaaagaatagaaattatcaaaaagtcagaacaaatagtt
atggaaattgaaaagtattatgaagaaggttaccttacagatgatcaaagatataaagaa
gtagttaaagtctgggaaaagacaatagcggacgttacagaagtaacaagtaaagaattt
agaaaatatccatttaatcctgtatggatgatggttgactccggtgcaaggggtaacatt
gaccagttaaaacagcttgcaggtatgaggggtcttatggctgatccatcaggtaaagtt
attgagttacctattaaatcaaactttagaaatggtctttctgaacttgaattctttatt
tcaacacacggagctagaaaaggttctgcagatacagcattaagaacatctacagcaggt
taccttacaagaagacttgtagacgttgcacaatcaattacagtaacagaaccagattgt
ggaacatcaaagggtatagaagcaagagaattaatagcagacggattgagaatagaaaaa
cttgcagattatctctttggtagagtacttgcatcagatgttgtagaccctgtaacagat
gaaataattgtaaatccaacaacaggaaagaaatatgtaaaagatgtaatgttagatgaa
gaagatgcagaattccttgcaaattacagatcaacaattcctgtttatgaagtacatgaa
aaattaagcgtagataaaatcaatctttacttatacaatattctcaatagtgatgtcctt
gttgatggagaattattatatgcaaaaggaacagtaatagacaatgatataatagtttca
ttaaaacagcataatataaaagaagttgatgtaaaagaatataaagtagttaatttcgtt
catgtaggtgatgcaattaaagttgaagatgaaaacggaaagattatcacacttgcaaat
tatcaggaaaaaattgatgctgatacagcaagaaaattagaaagatataatatagaaaca
atagaggtaagaccttcaatctatgtaagatcaatcttaacctgtgaggcagaacatggt
gtttgtgctaaatgttatggtatggatctttcaaaccacaaaatagtaaatataggtgaa
tctgtaggtatcatagcagcacagtctataggtgaacctggaacacagcttacaatgaga
acattccatacagggggtattgctacagcaggtgatattactcagggtcttccaagagca
gaagaattatttgaagcaagaaagaacttaaaaggtcctgaagcagaattctcaacagta
aaaggtatagtaagaaaagtgaacagagatgaaaaaggaagacttgtaattattgttgaa
gatctaaaaggagaactatatacatatatagcagatcctaaggttaaaccaacagtaaat
gaaggtgacaaggttgaacctggctacagattaacttcaggtaatataaaaccaagaaga
ttacttgaagagcttggtgcggaagtaacctttgattacctattaaaagaaattaaaaag
atatatgctgaacagggtgttgaaattcacgataaacactttgaaataataatcaaacaa
atgttcaacaaagttgaaataacatatgctggagatacagactttatgccaaaagacctt
gtaaacctcaaaacagttgaaaaggtaaacaaacaaatctatgaagcaaataaaaaggtt
gaagaaaacagagaaatggcaataggtaaaaaattagcagaaaaaatcattgtaaaagtt
gatgaagagaatgaaacaataggagaaataggagatacagtaacagaagaattattaaat
agaataattgcagctggaataaaagaaattgaagtattcaaatcagaacctcaattactc
gaaaatgaagatgaagaaattaggcttgttggagaaaaagaaacattattaattgcgcca
aaagaaccagcaagatacgaaagaaaacttttaagaataacaaaatcatctcttgaaaga
gaaggttggttaggtgcagcatcattccagcaaacagttcaggtattaacagaagcagca
ttagaaggaagagaagactacttattgggattaaaagaaaatgttatagttggacagcca
attccagctggaacaggattaaaagcattcttagaatcagaaatctcaatattcgaatta
ccaacatatccaacagaagatacaaaaacagatgaaagcgaaagcgcagcatcataa
DBGET
integrated database retrieval system
