Marinitoga piezophila: Marpi_2002
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Entry
Marpi_2002 CDS
T01665
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mpz
Marinitoga piezophila
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpz03009
]
Marpi_2002
Enzymes [BR:
mpz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Marpi_2002
Ribosome biogenesis [BR:
mpz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Marpi_2002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_11
PCMT
Methyltransf_4
PrmA
Cons_hypoth95
TRM5-TYW2_MTfase
Ubie_methyltran
UPF0020
Methyltr_RsmB-F
Methyltransf_12
N6_N4_Mtase
TRM
NodS
Methyltransf_18
Methyltransf_23
TPMT
Motif
Other DBs
NCBI-ProteinID:
AEX86378
UniProt:
H2J708
LinkDB
All DBs
Position
2096182..2097333
Genome browser
AA seq
383 aa
AA seq
DB search
MENICNAFGKCGGCTYLDIDYNEQLKKKTEEILELFNESKMEIKNYEGVITSPIKYHYRN
KMEYSFGNEYKDGPLTIGLRGKGRFYDVYSAKDCKIAPKDFGKIIEFSEEFFKDIPFRNY
RKHTGYLRHLVMRKGFKTNEILLNIATSSEDFHSYVEKWTEEVRKIELEGNIVSIYHTIT
DAKSTVVRPDEVRKLYGKDYFEEKVLDLTFKIGPFSFLQTNTLGSEVLYSKVLEYLNKTA
ETGLDLYCGAGTITLLMAKTLKKVVGVEIIKEAVDAAWENAKNNNVENVEFYLGDAKDVV
KELDIKFDSVVVDPPRAGLHKNVIKFLLDNKFENIVYVSCNPKNFVRDMIMLKELYEIEN
FVFVDMFPHTKHLESVALLKKKA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatatgtaatgcatttggtaaatgtggaggatgtacttatttagatatagat
tataatgagcaattgaagaaaaaaacagaagagattttagaacttttcaatgaaagcaaa
atggaaataaaaaattatgaaggtgtaattacttcacctattaaatatcattacagaaac
aaaatggaatattcatttggtaatgaatataaagacggtccccttacaataggtttaaga
ggtaaagggagattttatgatgtttattctgctaaagactgtaaaatagccccaaaagac
tttgggaaaataatagaattttcagaagagttttttaaggatataccatttagaaattat
agaaaacatactggttatttaagacatcttgttatgagaaaaggatttaaaaccaatgag
attcttttaaatattgcaacatcttcagaagattttcattcatatgttgaaaaatggact
gaagaagtaagaaaaatagaacttgaaggaaatatagtaagtatatatcataccattaca
gatgcaaaatcaacggtagtcagacctgatgaagtaagaaaactttatggaaaggattat
tttgaggaaaaagtacttgatttaacctttaaaataggtcctttttctttcttgcaaaca
aatacattgggatctgaagtgttatattcaaaagttctggaatatttaaacaaaactgca
gaaacaggattagacctttattgtggtgcaggaacaattacattgttaatggcaaaaaca
ttaaaaaaggttgttggcgtggaaataataaaagaggctgttgatgcagcatgggaaaat
gcgaaaaataataatgttgaaaatgttgaattttatcttggagatgcaaaggatgtagta
aaggaattggatattaaatttgatagtgtggttgttgacccgccaagggcaggattgcat
aaaaacgttattaaattccttttagacaataaatttgaaaatatcgtatatgtttcatgt
aatcccaaaaactttgtaagggatatgattatgcttaaagaattgtatgaaattgaaaat
tttgtttttgtagatatgttccctcacactaaacatcttgaatcagtagcgctcctgaag
aaaaaagcttag
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