Mumia qirimensis: AB3M34_00395
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Entry
AB3M34_00395 CDS
T10923
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mqr Mumia qirimensis
Pathway
mqr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB3M34_00395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_00395
Enzymes [BR:
mqr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB3M34_00395
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB3M34_00395
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB3M34_00395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
XEK80098
LinkDB
All DBs
Position
89655..90545
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVDALVGDLSRRLGVSEGEPRAIVAAYPAAISALKTYDPPVSALAGLLVDDVTRR
GKFLDISAGGLHLVIHLARAGWLRWKDEQPKAPPRPGGGKNPLAFRVVLDDGSGFDLTEA
GTKKGLAVYLVRDPAEVPGIARLGPEPLDDAFTLDVFRGILEAAGRSQIKGVLRDQSQIA
GIGNAYSDEILHVAKMSPFKPASAIVASDEDLETLYAAIGTTLRDAIARSDGLAASELKR
EKKSGLRVHARTGETCEVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSKLLR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctcccggaggtcgatgcgctggtcggcgacctgtcgcgtcgcctgggcgtc
tccgagggagagccccgtgcgatcgtcgccgcgtacccggccgcgatcagtgcactgaag
acgtacgacccgcccgtgagcgcgctcgccggcctcctcgtcgacgacgtcacgcgccgc
ggcaagttcctcgacatctccgcagggggtctccacctcgtcatccacctcgcccgtgcg
ggatggctgcggtggaaggacgagcagccgaaggcgccaccgcgaccgggtggcggcaag
aaccccctcgccttccgtgtggtcctcgacgacgggtcgggcttcgacctcacggaggcc
ggcaccaagaaggggctcgcggtctacctcgtacgcgaccccgccgaggtccccggcatc
gcccggctcggacccgagccgctcgacgacgcgttcacgctcgacgtcttccgcggcatc
ctcgaggcggcaggccggtcgcagatcaagggcgtgctgcgcgaccagtcccagatcgcc
ggcatcggcaacgcctactccgacgagatcctgcacgtcgcgaagatgtcgccgttcaag
ccggcgagcgcgatcgtcgcgtccgacgaggacctcgagacgctgtacgcggcgatcggt
acgacgctgcgcgacgcgatcgcccgctccgacggactggccgcgtccgagctcaagcgg
gagaagaagtcggggctgcgcgtccacgcccgtacgggtgagacctgcgaggtctgcggc
gacaccgtccgcgaggtgtcgttcgccgactcgtccctgcagtactgcccgacctgccag
accggcggcaagccgctcgccgaccggcggatgtcgaagctgctgcggtag
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