Mumia qirimensis: AB3M34_01715
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Entry
AB3M34_01715 CDS
T10923
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mqr Mumia qirimensis
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mqr03032
]
AB3M34_01715 (topA)
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_01715 (topA)
Enzymes [BR:
mqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB3M34_01715 (topA)
DNA replication proteins [BR:
mqr03032
]
Prokaryotic type
DNA Topoisomerases
AB3M34_01715 (topA)
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3M34_01715 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XEK80346
LinkDB
All DBs
Position
370916..373711
Genome browser
AA seq
931 aa
AA seq
DB search
MRRRGICPGPGAPSNVTSLVIVESPKKIAQIAGYLGKGYVVEASFGHVRDLPNGAAEVPA
KYKGQPWARLGVDVEGSFDPVYVVPADKKAQITKLKKLLKESDELILATDEDREGEAIAW
HLVDELKPKVPVRRMTFNEITPQAIAHAIENTRDINTDLVDAQETRRILDRLYGYEVSPV
LWKKVMSGLSAGRVQSVATRMVVEREWERIAFRAASYWDLDARFDAGAGKDPRVFPARLL
SVSGARVAQGRDFSSEGQLTNTDKVVHLDETAAAALAEGLREQTFTVQSVESKPYTRRPY
APFRTVTMQQEAGRKLGWGAQRAMQVAQRLYEGGYITYMRTDSTTLSQTALNAARAQVRE
LYGPDYLPDAPRTYASKVKNAQEAHEAIRPAGESFRTPAETGLSGDEFRLYELIWMRTMA
SQMKDARGNTVTVRIGATATSGEECVFTSSGRTITFYGFLKAYVEGADDPETDSDDKQTR
LPDVAQGDTVTVDALDASGHTTKPPARFTEQTLIGELEKREIGRPSTYASIIQTILNRGY
VYKKGTALVPSWVAFSTVRLMVRHFERLVDYDFTAMMEDVLDEVAAGREERSNVLHGFYY
GGKDEDTGLKRLVDDLGDIDARELSTFELGDGGEGIALRVGRYGPYLEGPDADGVLQRAN
VPDDLPPDELTLDKAKELLANPAGQDRELGTDPATGRVVVAKNGRFGPYVTEVLPEDAPK
KEKPRTGSLLKSMDLDTVTIDDAVKLLALPRVVGSDPETGDEITAQNGRYGPYLKKGTDS
RSLETEEQIFDITLPEALAIYAQPKQRGRRAAAAPLKELGEDPESKKPVVVKDGRFGPYV
TDGEVNATLRKGDEVDTITLARAAELLAEKRAKGPAKKTTRKAPAKKTAAKKATAKKAPA
KKAAAKTAAKKTTAKKAPAKKTTASTATPES
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcgcggcatctgtccaggaccaggagcaccgagcaacgtgacctctctcgtc
atcgtcgagtcgccgaagaagattgcccagatcgccggctatctcggcaagggctacgtc
gtcgaggcgtccttcgggcacgtccgcgacctgcccaacggcgctgcggaggtgcccgcg
aagtacaagggtcagccgtgggcccgtctcggtgtggacgtcgagggcagcttcgacccg
gtgtacgtcgtgccggcggacaagaaggcgcagatcaccaagctcaagaagctcctcaag
gagtccgacgagctcatcctcgcgacggatgaggaccgcgagggcgaggccatcgcctgg
cacctcgtcgacgagctgaagccgaaggtcccggtgcgccggatgaccttcaacgagatc
accccgcaggccatcgcacacgcgatcgagaacacccgcgacatcaacaccgacctcgtc
gacgcccaggagacccgccggatcctcgaccgcctctacggctacgaggtcagcccggtc
ctctggaagaaggtcatgtcgggcctgtcggccgggcgcgtccagtccgtcgcgacgcgc
atggtcgtggagcgcgagtgggagcgcatcgcgttccgcgccgcctcgtactgggacctc
gacgcccgcttcgacgccggtgccggcaaggatccgcgggtcttccccgcccgtctgctg
tcggtctccggcgcccgcgtggcgcagggccgcgacttcagctccgagggccagctcacc
aacaccgacaaggtggtgcacctcgacgagaccgccgccgctgcgctggccgagggcctg
cgcgagcagaccttcaccgtgcagtcggtcgagtccaagccgtacacccgccgcccgtac
gcccccttccgcaccgtcacgatgcagcaggaggccggacgcaagctcggctggggcgcg
caacgcgcgatgcaggtcgcccagcgcctgtacgagggcggctacatcacctacatgcgt
accgactcgaccacgttgtcgcagacggctctcaacgccgcgcgggcgcaggtccgtgag
ctctacgggccggactacctgccggacgcgccgcggacgtacgcgtcgaaggtgaagaac
gcgcaggaggcgcacgaggcgatccgcccggcgggcgagtccttccgcacacctgcggag
acgggcctgtccggcgacgagttccgcctgtacgagctgatctggatgcgcacgatggcg
tcgcagatgaaggacgcacggggcaacaccgtgaccgttcgcatcggcgcgacggcgacg
tcgggcgaggagtgcgtgttcacctcgtcgggccgcacgatcaccttctacggcttcctc
aaggcgtacgtcgagggtgcggacgaccccgagacggactccgacgacaagcagacgcgg
ctccccgacgtcgcccagggcgacacggtgaccgtcgacgcgctcgacgcgtccggccac
accaccaagccgccggcccgcttcaccgagcagacgctgatcggcgagctggagaagcgc
gagatcggccgcccgtcgacctacgcgtcgatcatccagaccatcctcaaccgcggctac
gtctacaagaagggcacggcgctggtcccctcgtgggtggcgttctcgaccgtgcggctg
atggtgcgccacttcgagcggctcgtcgactacgacttcaccgcgatgatggaggacgtc
ctcgacgaggtcgcggcgggtcgcgaggagcggtcgaacgtcctgcacggcttctactac
ggcggcaaggacgaggacaccggtctcaagcgcctcgtcgacgacctcggcgacatcgac
gcccgcgagctctcgaccttcgagctcggtgacggcggcgagggcatcgcgctgcgggtc
ggacgctacggcccgtacctcgaggggcccgacgccgacggcgtgctgcagcgggcgaac
gtccccgacgacctgccgccggacgagctgacgctggacaaggccaaggagctcctcgcg
aacccggccggtcaggaccgcgagctcggcaccgacccggccaccgggcgcgtcgtcgtc
gcgaagaacggccgcttcggaccgtacgtgaccgaggttctgcccgaggacgcacccaag
aaggagaagcctcgtacggggtcgctcctcaagtcgatggacctcgacacggtgacgatc
gacgacgcggtcaagctgctcgccctcccgcgcgtggtcggcagcgaccccgagaccggt
gacgagatcactgcgcagaacggccgctacgggccgtacctcaagaagggcaccgactcc
cgctccctggagaccgaggagcagatcttcgacatcacgctgccggaggcgctggcgatc
tatgcacagccgaagcagcgtgggcgccgcgcggccgccgcgccgctcaaggagctgggc
gaggacccggagtccaagaagccggtcgtcgtgaaggacgggcgtttcggtccgtacgtg
accgacggcgaggtcaacgcgacgctgcgcaagggcgacgaggtggacaccatcacgctc
gcgcgggccgccgagctgctcgcggagaagcgcgcgaagggcccggcgaagaagacgacc
cgcaaggcgcctgccaagaagacggccgcgaagaaggcgacggccaagaaggctccggcg
aagaaggccgccgcgaagacggctgccaagaagacgacggccaagaaggctcccgcgaag
aagacgacggcgtcgacagcgacgccggagtcctga
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