Mumia qirimensis: AB3M34_04360
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Entry
AB3M34_04360 CDS
T10923
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mqr Mumia qirimensis
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mqr03032
]
AB3M34_04360
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_04360
Enzymes [BR:
mqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB3M34_04360
DNA replication proteins [BR:
mqr03032
]
Prokaryotic type
DNA Topoisomerases
AB3M34_04360
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3M34_04360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyco_hydro_19
NDUF_B8
Motif
Other DBs
NCBI-ProteinID:
XEK80859
LinkDB
All DBs
Position
915279..916286
Genome browser
AA seq
335 aa
AA seq
DB search
MRFRTVSRNERGWTRRRAGRGFQYLDERGQVLTGSDRERCVALAIPPAWEDVWICRWPSG
HLQATGRDVAGRVQYLYHPLWRERMEQEKHERVLEVAHRLPEGRERVLRDLDATGVTRER
ALGAAFRLLDRGLFRVGNDRYAAEGGGYGLATLRKDHVTLRRDRSTMEFAYEGKAGVAQR
VVVGDPLAYDVVGPMRRRRGGETLLAFQERRRWSELSSPDVNAYLQERVCADMTAKDFRT
WHATVLAAVSLASVDGTATSERARRRAVAATMREVSDVLGNTPAVARASYVNPRVVELFD
EGVTVAPTLHRLGPRIDEERDRPALERAVLKLLTD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaggttccgcacggtctcacgcaacgagcgcgggtggacgaggcggcgcgcggggcga
gggttccagtacctcgacgagcgcggccaggtcctcaccgggagcgaccgcgagcgctgc
gtcgccctcgcgatcccacccgcgtgggaagacgtgtggatctgccgctggccctccgga
cacctgcaggcgaccggacgcgacgtcgccggacgcgtccagtacctctaccacccgctg
tggcgcgagcggatggagcaggagaagcacgagcgggtgctggaggtcgcgcaccggcta
ccggagggccgcgagcgggtccttcgggacctggacgcgaccggggtgacgcgtgagcgg
gcgttgggggcagcgttccggctgctcgatcgcgggctgttccgggtgggcaacgaccgg
tacgccgccgagggcggcgggtacggactggcgacgctgcgcaaggaccacgtgaccctc
agacgcgaccggtcgaccatggagttcgcctacgaggggaaggccggggtcgcgcagcgt
gtggtcgtcggtgacccgctggcgtacgacgtcgtcggaccgatgcggcgacgtcgcggc
ggcgagacgctgctcgccttccaggagcgtcggcggtggagcgagctgtccagccccgac
gtgaacgcgtacctgcaggagcgggtctgcgccgacatgacggccaaggacttccggaca
tggcacgcgaccgtgctggccgcggtctcgctcgcctccgtggacggcacggccacgtcg
gagcgcgcacgacggcgcgccgtcgcggcgacgatgcgcgaggtctccgacgtgctcggc
aacacgccggccgtcgcccgtgcgtcgtacgtcaacccgcgggtcgtcgagctgttcgac
gaaggggtgaccgtcgcgccgaccctccaccgcctcgggccgcggatcgacgaggagcgc
gaccggcccgctctggagcgtgcggtgctgaagctgctgacggactga
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