Mumia qirimensis: AB3M34_06440
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Entry
AB3M34_06440 CDS
T10923
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mqr Mumia qirimensis
Pathway
mqr03420
Nucleotide excision repair
mqr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB3M34_06440
03430 Mismatch repair
AB3M34_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_06440
Enzymes [BR:
mqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3M34_06440
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3M34_06440
MMR (mismatch excision repair)
Other MMR factors
AB3M34_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
EAD7
Motif
Other DBs
NCBI-ProteinID:
XEK81257
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All DBs
Position
1342940..1346257
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AA seq
1105 aa
AA seq
DB search
MTATAEATATAVELPQLIHDADHLRTVLGIPFSAEQMAAIQAPTDRPSAIIAGAGSGKTT
VMAARVVWLVGHDGVLPGAILGLTFTNKAASELAHRVRQALETLAREAGMPDLLERYGTP
TVSTYHAYAGTLITEYGLLRGFEPDLRVTTDASRFQRAFRAIASYPGSLTHASTSLPTVI
GEVLALDGQMAEHLVTPDEVRAFDAEMRVDVERATAEMKPVKLHGELVEVTRRRDELVTL
VERYRAAKSEDGVVDFSDQMERGARLALECDEVSRSQRERFSVVLLDEYQDTSVAQRDML
RGLFSGGSGDGLGHCVTAVGDPCQGIYGWRGAAASNLTAFLDDFPADPDRRGASRDDDAT
RGSLFHLLVNRRSRAEILEVANRVAAPYYQATEVVRPLVAADGTDGGTVRAALHESVADE
VDWIVDQVAGAHGDGATPWSEIAVLVRTKTEVPTLVAALRAEGVPVEVVGLSGLLAQPEV
SDVVSVLRVLSDQTANAALLRLLTGPRWRIGPRDLALLGRRAKQLVGAMREAPSASLEEE
LERSVRGTDPTEIVSLADAVDSPDDEGHRLPYSDEARVRFAEVSRLLRGLRRRSSGSPAD
TARLAVAALGIDVELAATPGTAARVAQDNVSRLLDVVADVVATDPSAGLSAVLAYLDAEE
DYNGGLEVASPSDSDSVKLLTVHTAKGLEWDVVLVPFLTADVFPSTRSRPAWTKSASALP
HDLRGDGAELPVVEELSNAGHKEFQAAMKADAAMEEVRLAYVAFTRARRLLIASGHRWSR
TRKDPSEPSAYLETVATWLRSRGSDAELWVPEPEHDADNPLRGRADAVVWPVEPPEDELV
RRREAAALVRAYAADPPSDPQPMLIEVGDAESPEESAQLARLAEIDEEVERLLTEARRTQ
SETLEVPLPPNLSTTSLMAMRKDPAAFARSLARPLPRPPAPAARFGTRFHAWIEAHFGQQ
TLIGDDELPGLRGHEIADEVELAELIRAFESGPMGDRTPYAIEEPFTLRLGGQLVSGRID
AVYRSGDEFEIVDWKTNRRPDADPLQLAVYRLAWAEKHGVPLERVKATFHYVRLGTSVTP
PDLPDRAALERLVQPIDGGVGSPRG
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaaccgccgaggcgaccgcgaccgccgtcgagctcccgcagctcatccacgac
gccgaccacctccgtacggtcctcggcatcccgttctccgccgagcagatggcggcgatc
caggcgccgaccgaccggccgagcgcgatcatcgccggcgccggttcgggcaagacgacg
gtgatggccgcacgggtggtctggctcgtcggccacgacggagtgctgccgggcgcgatc
ctcggcctcacgttcaccaacaaggctgcctccgagctcgcgcaccgcgtccgtcaggcg
ttggagacgctggcgcgtgaggcggggatgcccgacctgctcgagcggtacggcacgccg
accgtgtccacctaccacgcctacgccggcacgctcatcaccgagtacggtctgctgcgc
ggcttcgagcccgacctgcgggtgacgaccgacgcctcgaggttccagcgtgcgttccgc
gccattgcctcgtaccccggctccctcacgcacgcgagcacgtccttgccgaccgtcatc
ggggaggtgctggctctcgacggtcagatggccgagcacctcgtgacgcccgacgaggtg
cgggcgttcgacgccgagatgcgtgtcgacgtcgagcgagcaacggccgagatgaagccg
gtcaagctccacggcgagctcgtcgaggtcacacggcgccgcgacgagctggtgacgctc
gtcgagcgctaccgtgccgcgaagtccgaggacggggtcgtcgacttctccgaccagatg
gagcgcggggcccgcctggcgctcgagtgcgacgaggtgtcgcggtcgcagcgggagcgg
ttctcggtcgttctcctcgacgagtaccaagacacctccgtcgcccagcgcgacatgctt
cgtgggctgttctcaggcgggagcggcgacggcctcggacactgcgtgaccgccgtgggc
gacccgtgccagggcatctacggctggcgcggtgcagcggcgagcaacctcacggcgttc
ctggacgactttccggccgatcctgaccggcgcggtgcgagccgtgacgacgacgcgacc
cggggcagcctcttccacctgctggtcaaccgccgcagccgggccgagatcctcgaggtc
gccaaccgggtggccgctccgtactaccaggcgaccgaggtcgtacgcccgctggtggcg
gccgacggcacggacggcgggacggtccgtgccgcgttgcacgagtcggtggccgacgag
gtcgactggatcgtcgaccaggtcgccggagcccatggcgacggcgcgactccgtggtcg
gagatcgccgtcctcgttcgcaccaagaccgaggtccccacgctggtcgccgcgctgcgc
gccgagggcgtcccggtggaggtcgtcgggctctctggcctgctcgcgcagccggaggtg
tccgatgtcgtgtcggtgctgcgggtgctctccgaccagacggccaacgccgccctgctc
cggctcctcaccggcccacggtggaggatcggcccgcgcgacctcgcactcctgggccgc
cgcgccaagcagctcgtcggggcgatgcgcgaggcgcccagcgcgtcgctcgaggaagag
ctcgagcgctcggtccgcggcaccgacccgaccgagatcgtgtccctcgccgatgcggtc
gacagtccggacgacgaagggcaccgcctcccgtactccgacgaggcgcgcgtccgcttc
gccgaggtctcgcgcctcctgcgagggcttcgtcgccgttcgagcggctcgcccgccgac
accgcgcggctcgcggtggcggctctcggcatcgacgtcgagctcgccgcgacgcccggc
acggcggcgcgggtcgctcaggacaacgtctcccggctgctcgacgtcgtcgccgacgtc
gtggcgaccgacccgtcggccggactgtcggcggtgctggcctacctcgacgccgaggag
gactacaacggcggcctcgaggtggcgtcgccgagcgactccgactcggtcaagctcctg
acggtccacacggccaagggcctggagtgggacgtcgtcctcgtgccgttcctcaccgcc
gacgtgttcccctcgacccggtcgcgaccggcctggacgaagagcgcatccgcgcttccg
cacgacctccgcggcgacggcgccgagctcccggtggtcgaggagctgagcaacgccggt
cacaaggagttccaggcggcgatgaaggccgacgcggcgatggaggaggtccggctcgcc
tacgtcgcgttcacgcgcgcccgccgcctgctgatcgcgagcggccatcggtggagccgg
acccgcaaggacccgtccgagccgagcgcctacctcgagacggtggcgacctggctgcgc
agccgtggctccgacgccgagctgtgggtccccgagcccgagcacgatgccgacaacccg
ttgcggggtcgtgccgacgccgtcgtctggccggtggagccgcccgaggacgagctcgta
cgccgccgcgaggccgccgcgctcgtccgggcgtacgcggcggacccgccgtccgatccg
cagccgatgctcatcgaggtcggcgacgcggagtcgccggaggagtccgcgcagctcgcc
aggctcgccgagatcgacgaggaggtcgaaagactcctgaccgaggcgcgccgcacgcag
agcgagacgctggaggtgccgttgccgccgaacctgtcgaccacctccctgatggcgatg
cgcaaggatccggcagccttcgcccgcagcctcgccaggccgctcccgcgtccccccgcg
cccgccgcacggttcggcacgcggttccacgcctggatcgaggcgcacttcggccagcag
accctgatcggtgacgacgagctccccgggctgcgtgggcacgagatcgccgacgaggtc
gagctggccgagctgatccgcgcgttcgagtcgggtccgatgggcgaccgcaccccgtac
gcgatcgaggagccgttcaccctgcggctcggcggtcagctggtcagcggacgcatcgac
gcggtctaccggtcgggcgacgagttcgagatcgtcgactggaagacgaaccgccggccc
gacgccgatccgctgcagctggccgtctaccgcctggcgtgggccgagaagcacggtgtc
ccgctggagcgggtgaaggcgacgttccactacgtgcggctgggcacctctgtgacgccg
cccgacctgcccgaccgcgctgcgctcgagcgcctcgtgcagccgatcgacgggggcgta
ggctcgccgcgtggctga
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