Mumia qirimensis: AB3M34_07685
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Entry
AB3M34_07685 CDS
T10923
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mqr Mumia qirimensis
Pathway
mqr03018
RNA degradation
Brite
Enzymes [BR:
mqr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AB3M34_07685
Messenger RNA biogenesis [BR:
mqr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB3M34_07685
Ribosome biogenesis [BR:
mqr03009
]
Prokaryotic type
rRNA processing factors
AB3M34_07685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XEK81494
LinkDB
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Position
1593199..1596108
Genome browser
AA seq
969 aa
AA seq
DB search
MLDEQNPPTPASDDADSGGNDPAVAVTRRRRTASRPAGPPPATAVFSEASAPAKPVKATR
KRKAAAPAEPTAGPSDAPAVETPAAEAPAAEAPAASTPEVAAPTVTRSTRTRKTASRSAG
PAAPAPAAKDVVAIEEPAADEDELVEDELVETDLADVTAEPALEDLDDDAEDDDAEETSV
PEAKSTVARSPFVAPLFQAPEPTAAPRRRRRADDEERDETDRPPEEVRTPRSRRGADDEP
DTDADVDVDAESDDNGSDDADDGMPARRRRRRGGRRRRRPGSGDAENLDPDAEPDDEDES
PRSETADAESVDDDTADDDSTDSGDESTSGSSRRRRRRRRRGEDSDTAADDPENTVVRVR
ERRSAEDEITSVAGSTRLEAKKQRRREGREAGRRRTPIVSEAEFLARREAVKREMVIRQR
DDLTQIAVLEDDVLVEHYVARESQSSMIGNVYLGRVQNVLPSMEAAFVDIGKGRNAVLYA
GEVDWSKLGDGKPRKIEEVLKSGQAVLVQVTKDPIGHKGARLTSQVSLPGRFLVYVPGGQ
TSGISRKLPDTERNRLKSLLKGILPEDAGVIIRTAAEGATEDQLTRDVEALDARWKDIEK
KSTSSGNAPQLLYGEPDLTIKVVRDLFNEDFSRLVVEGSDAADMIEGYVSHVAPDLKDRV
ELWNGSASGDVFSAHRIDEQIAKALDRKVWLPSGGSLIIDRTEAMTVVDVNTGKFTGSGG
NLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRMVECLGRDRTR
HQVAEVTSLGLVQMTRKRIGTGLLEAFSEPCEHCSGRGLILHDHPVEPKKVAEENRRGRG
GRGGRGGDGQKSGEGQRSGKSQRGSSPQDDSSPQDDAKGPAPTDAPAAVIAPEAVMEVPD
GSEAAESTESASESTGPRKRRRRRSGSASQASATGSNEELPSAEGSVEAPGTLGAGDPDP
VLTGDGETP
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgaacagaacccgcccaccccggcctccgacgacgccgactcggggggcaac
gatcccgcagtcgccgtgacccgtcgacgtcgtacggcgtcgcggcccgcaggcccaccg
cccgcgacggcggtcttctccgaggcgagcgcgccggcgaagcccgtcaaggcgacgcgc
aagcgcaaggccgccgctccggccgagccgaccgccggcccgtccgacgctcccgcggtc
gagactcccgccgcggaggcgccggctgctgaggcaccggctgcttcgacacccgaggtg
gccgcgccgacggtcactcggtccacccggacccgcaagaccgcgtcgcggtccgccgga
ccggctgcgccggcgcctgccgcgaaggatgtcgtcgcgatcgaggagcctgccgccgac
gaggacgagctcgtcgaggacgaactggtggagaccgacctggctgacgtgacggccgag
ccggctctcgaggatctcgatgacgacgccgaggatgacgacgccgaggagacctccgtc
cccgaagcgaagtcgaccgtcgctcgctcgcctttcgtcgcacctctcttccaggcgccg
gagccgacggctgcgcctcgtcgtcgccgtcgtgccgacgacgaggagcgcgacgagacc
gatcgtccgcccgaagaggtccgcacgccgcggtctcgccggggcgctgatgacgagcct
gacaccgacgcggacgtcgacgtcgacgccgagtcggacgacaacgggtccgacgatgcc
gacgacggcatgccagcgcgccggcgccgccgccgcggaggccgacgccgtcgccgtccc
gggagcggtgacgccgagaacctcgaccccgacgccgagcccgacgacgaggacgagtcc
ccgcgctccgagaccgcggacgccgagagcgtcgacgacgacacggcggacgacgactcc
acggactccggcgacgagtcgaccagcggatcgagccgccgccggcgccgccgtcgtcgg
cgtggcgaggacagcgacaccgctgccgacgaccccgagaacaccgtcgtacgggtccgc
gagcgccgcagcgcggaggacgagatcaccagcgtcgccggctcgacgcgtctcgaggcc
aagaagcagcgccgccgcgagggtcgcgaggccggccggcgccgtaccccgatcgtctcc
gaggccgagttcctggcccgtcgcgaggcagtcaagcgtgagatggtcatccgccagcgc
gacgacctgacgcagatcgcggtgctggaggacgatgtcctggtcgagcactacgtcgca
cgcgagtcccagtcgtcgatgatcggcaacgtctacctgggtcgcgtccagaacgtgctt
ccctcgatggaggcggccttcgtcgacatcggcaaggggcgcaacgccgtcctgtacgcc
ggcgaggtcgactggagcaagctcggcgacggcaagccacgcaagatcgaagaggtcctg
aagtccggtcaggccgtcctcgtccaggtgacgaaggacccgatcgggcacaagggcgca
cgcctgacgagccaggtgagccttcctggccgcttcctcgtctacgtcccgggcggccag
accagcggcatctcccgcaagcttcccgacaccgagcgcaaccgcttgaagtccctgctg
aagggcatcctccccgaggacgcgggcgtcatcatccggaccgcagccgagggtgcgacc
gaagaccagctgacccgcgacgtcgaggcgctcgatgcccgctggaaggacatcgagaag
aagtccacctccagcggcaacgctccccagctgctgtacggcgagccggacctgacgatc
aaggtcgtccgcgacctcttcaacgaggacttctcgcgcctggtcgtcgagggcagcgac
gctgcggacatgatcgagggctacgtcagccacgtggcaccggacctcaaggatcgggtc
gagctctggaacggctccgcctccggcgacgtcttctccgcccaccgcatcgacgagcag
atcgccaaggcgctcgaccgcaaggtctggctcccgtcgggtggctcgctgatcatcgac
cgcaccgaggcgatgaccgtcgtcgacgtcaacaccggcaagttcacggggtcgggcggc
aacctcgaggagacggtcaccaagaacaacctggaggcggccgaggagatcgtccgccag
ctccgcctgcgcgacatcggcggcatcattgtcgtcgacttcatcgacatggtgctcgag
agcaatcgcgacctcgtgctgcgtcgcatggtcgagtgcctcggccgcgaccgtacgcgt
caccaggtggcagaggtcacgtcgctcgggctcgtgcagatgacgcgcaagcggatcggc
acagggctgctggaagcgttcagcgagccgtgcgagcactgctcgggtcgcgggctgatc
ctgcacgaccacccggtcgagccgaagaaggtcgctgaggagaaccgccgtggacgtggc
ggccgtggcggccgcggcggcgacggtcagaagtccggagagggtcagcgctcgggcaag
tcccagcgcggcagctcgccccaggacgacagctcgccccaggacgacgccaagggtcct
gcacccaccgacgccccggccgctgtcatcgcgcccgaggccgtcatggaggtcccggac
ggttccgaggctgcggagtcgaccgagtcggcgtcggagtcgacagggccgcgcaagcgg
cgtcgacgccgcagcggctccgcgtcgcaggcgtcagccacgggctcgaacgaagagttg
ccgtcggccgaaggctctgtggaggcgcccggtacgctgggagccggagaccccgacccc
gttttgaccggtgacggggagactccgtag
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