Mumia qirimensis: AB3M34_09235
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Entry
AB3M34_09235 CDS
T10923
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mqr Mumia qirimensis
Pathway
mqr03030
DNA replication
mqr03430
Mismatch repair
mqr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3M34_09235 (dnaE)
03430 Mismatch repair
AB3M34_09235 (dnaE)
03440 Homologous recombination
AB3M34_09235 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mqr03032
]
AB3M34_09235 (dnaE)
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_09235 (dnaE)
Enzymes [BR:
mqr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3M34_09235 (dnaE)
DNA replication proteins [BR:
mqr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3M34_09235 (dnaE)
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3M34_09235 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
HHH_3
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
XEK81784
LinkDB
All DBs
Position
1906402..1909938
Genome browser
AA seq
1178 aa
AA seq
DB search
MSSADSFVHLHVHTEYSMLDGAARLTEMFARTAELGMDAIAMTDHGNVFGAYDFYRKAKA
AGVKPIIGMEAYLTPDTHRTERKRVQWNKGGGDDVSGGGAFTHMTLLAESTAGMHNLFRL
SSRSSLEGFFYKPRADRELLSEYAQGMIATTGCPSGEVQTWLRIGDYAKARQSAAEFMDI
FGRDNFFVELMDHGLSIETRVRDDLLRLAKDLDLRLVATNDSHYTHPDDSTAHEALLCVQ
SGKTLADPTRFKFDGNGYYIKSPAEMRKIWEQDAGLAEACDTTLLIAERCEVEFTEGNGT
FMPRFPVPDGESEETWLLKEVDRGLAERYPDGITEDVRKRADFEVDVILKMGFAGYFLVV
ADFINWAKENGIRVGPGRGSGAGSMVAYAMRITDLDPIVHGLIFERFLNPDRVSMPDFDV
DFDERRRGEVIRYVTDKYGDDRVSQIVTYGTIKSKQAVKDASRVLGYPFSMGERITKAMP
PLVMGKDVPLKEIFNAEHSRYNEGGEFRSLYDTDPDAKKVVDTAVGLEGLKRQWGVHAAG
VIMSSEPLLDIIPVMKREQDGAIITQFDYPTCESLGLIKMDFLGLRNLTVLDDALDNIKN
NRDETVVLEDLELYDDETFALLSRGDTLGVFQLDGGPMRALLRSMRPDSFEDISAVGALY
RPGPMGADSHNKYARRKNGREKVEAIHPDLADALEDILGETYGLIVYQEQVMAIAQQLAG
YTLGQADLLRRAMGKKKKSELDKQFENFSAGMRERGFSAAAVKTLWDILLPFSDYAFNKA
HSAAYGVVSYWTAYLKAHYPAEYMAALLTSVRGDKDKSAIYLNECRRMGIKVLPPDVNDS
EANFTAVGPDIRFGLSAVRNVGHNVVDAIVEARTQKEPFTDFADFMEKVPPVVCNKRVIE
SLIKSGAFDSLKHHRRALVTVHEDAVDQYVDLKRNEAIGQDSLFAGLDDGEAGFAGTAVV
VPDLDEWDKTTLLAHEREMLGLYVSDHPLFGLEHVLRAASDCTIGDVIADEERPDGSPIT
VAGLVTSIQRKLTKKGDPWAIVTVEDLEGAVNVMLFPSVYTLSGHLLVEDAVVVVKGRLK
RKEDTPEISAMELTAADLSVGDDGPVVISIPTARCTPPTLDQLRDVLSSHPGATEVHLRL
VGSQSTKLMRLDPRLRVSPSSSLIADLKALLGPGCLAS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgccgactcgttcgtgcacctccacgtccacaccgagtactccatgctcgac
ggcgcggcgagactgacggagatgttcgcccgtacggcggagctggggatggacgccatc
gccatgaccgaccacggcaacgtgttcggcgcgtacgacttctaccgcaaggcgaaggcc
gcgggcgtcaagccgatcatcggcatggaggcctacctcacccccgacacccaccgcacc
gagcgcaagcgcgtccagtggaacaagggcggcggcgacgacgtctcgggtggtggcgcg
ttcacccacatgactctgctggccgagagcacggccggcatgcacaacctgttccggttg
tcgtcacggtcgtcgctcgaaggcttcttctacaagccgcgcgccgaccgcgagctcctc
tccgagtacgcgcagggcatgatcgcgacgaccggctgcccctccggggaggtccagacc
tggttgcggatcggcgactacgccaaggcgcggcagtcggccgcggagttcatggacatc
ttcggccgcgacaacttcttcgtggagctgatggaccacgggctgtcgatcgagacccgg
gtccgcgacgacctcctgcggctcgccaaggacctcgacctccgactcgtcgcgaccaac
gactcccactacacgcaccccgacgacagcactgcccacgaggcgctgctgtgcgtccag
tccggcaagacgctggccgacccgacgcgcttcaagttcgacggcaacggctactacatc
aagtcgccggcggagatgcgcaagatctgggagcaggacgccgggctcgccgaggcctgc
gacaccacgctgctgatcgccgagcgctgcgaggtcgagttcaccgagggcaacggcacg
ttcatgcctcggttcccggtccccgacggcgagtccgaggagacctggctgctcaaggag
gtcgaccgcggcctcgccgagcgctacccggacggcatcaccgaggacgtccgcaagcgg
gccgacttcgaggtcgacgtgatcctcaagatggggttcgccggctacttcctggtcgtc
gccgacttcatcaactgggccaaggagaacggcatccgcgtcggccccggccgtggctcc
ggcgccggctcgatggtggcgtacgcgatgcggatcaccgatctcgacccgatcgtgcac
ggactgatcttcgagcggttcctcaaccccgaccgagtgtcgatgcccgacttcgacgtc
gacttcgacgagcgccggcgtggcgaggtcatccgctacgtcaccgacaagtacggcgac
gaccgggtctcgcagatcgtcacctacggcacgatcaagtccaagcaggcggtcaaggac
gcctcccgcgtcctcggctacccgttctcgatgggggagcggatcaccaaggccatgccg
ccgctggtgatgggcaaggacgtcccgctcaaggagatcttcaacgccgagcactcccgt
tacaacgagggcggcgagttccgctccctctacgacaccgaccccgacgccaagaaggtc
gtcgatacggcggtcgggctggagggcctgaagcggcagtggggcgtccacgccgccggc
gtcatcatgtcgagcgagccgctgctcgacatcatccccgtgatgaagcgcgagcaggac
ggcgcgatcatcacgcagttcgactacccgacgtgcgagtcgctcgggctgatcaagatg
gacttcctggggctccgcaacctcacggtcctcgacgacgccctcgacaacatcaagaac
aaccgcgacgagacggtcgtcctcgaggacctcgagctgtacgacgacgagacgttcgcg
ctgctgtcgcgcggcgacacgctgggcgtcttccagctcgacggcggcccgatgcgggct
ctgctccgcagcatgcgacccgacagcttcgaggacatctcggccgtcggcgcgctctac
cgtccgggcccgatgggcgccgactcccacaacaagtacgcccgccgcaagaacggccgc
gagaaggtcgaggcgatccaccccgacctcgccgacgcactcgaggacatcctcggcgag
acgtacggcctgatcgtctatcaagagcaggtcatggcgatcgcccagcagctcgccggc
tacacgctcggacaggccgacctgctccgtcgcgcgatgggcaagaagaagaagtccgag
ctggacaagcagttcgagaacttctcggccggcatgcgggagcggggattctccgcggcg
gcggtcaagacgttgtgggacatccttctgccgttctccgactacgcgttcaacaaggcg
cactccgcggcgtacggcgtggtgtcctactggaccgcctacctgaaggctcactatccc
gccgagtacatggcagccctgctgaccagcgtccggggcgacaaggacaagtcggcgatc
tacctcaacgagtgccggcgcatgggcatcaaggtcctgccgccggacgtcaacgactcc
gaggccaacttcacggcggtcggtcccgacatccgcttcggtctctcggccgtgcgcaac
gtcggacacaacgtggtcgacgcgatcgtcgaggcccgcacgcagaaggagcccttcacc
gacttcgccgacttcatggagaaggtcccaccagtcgtctgcaacaagcgcgtgatcgag
tccctcatcaagtcgggggcgttcgactcgctcaagcaccaccggcgtgcgctggtcacc
gtccacgaggacgcggtcgaccagtacgtcgatctcaagcgcaacgaggccatcggccag
gactccctcttcgccgggctcgacgacggtgaggcgggcttcgccggcacggccgtcgtc
gtcccggacctcgacgagtgggacaagacgacgctgctcgcccacgagcgggagatgctc
ggtctctacgtctccgaccacccgctcttcggcctcgagcacgtcctccgcgccgccagc
gactgcacgatcggcgacgtgatcgccgacgaggagcggccggacgggtcgccgatcacg
gtggccggcctggtgacgtcgatccaacgcaagctgaccaagaagggtgacccctgggcg
atcgtcaccgtcgaggacctcgagggtgcggtcaacgtgatgctgttcccctcggtctac
acgctgtcagggcacctgctcgtcgaggatgcggtcgtggtggtcaagggacgcctcaag
cgcaaggaggacacccccgagatctcggcgatggagctcactgccgccgacctgtcggtg
ggggacgacggtcctgtggtgatctcgatcccgaccgcgcggtgcaccccgccgacgctc
gaccagctccgtgacgtcctgtcgagccaccccggcgccaccgaggtgcacctgcggctc
gtgggcagtcagagcaccaagctgatgcggctggacccgcgactgagggtcagtccgtcg
tcgtcgctgatcgccgacctcaaggccttgctgggccctgggtgcctcgcgtcgtga
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integrated database retrieval system
