Mumia qirimensis: AB3M34_12195
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Entry
AB3M34_12195 CDS
T10923
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mqr Mumia qirimensis
Pathway
mqr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB3M34_12195 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_12195 (uvrA)
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3M34_12195 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB3M34_12195 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
RsgA_GTPase
nSTAND1
AAA_22
APS_kinase
DnaJ_CXXCXGXG
BCA_ABC_TP_C
NACHT
ATPase
MMR_HSR1
Viral_helicase1
MeaB
ExoX-like_C
Septin
Motif
Other DBs
NCBI-ProteinID:
XEK78111
LinkDB
All DBs
Position
complement(2507227..2510334)
Genome browser
AA seq
1035 aa
AA seq
DB search
MADRLLIRGAREHNLKDVSLELPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARIGHPH
CPTCGEPITKQTPQQIVDRIMEMEEGTRFQVLAPVIRGRKGEYLDLFRQLQSQGYSRARV
DGAVHNLADEPPTLAKQKKHHIEVVVDRLAVKPTSQQRITDSVETALNLADGLVLLDFVD
LPEDDPGRVRRFSEKLACPNEHPLAVDELEPRSFSFNAPFGACPECSGLGTRMEVDPELV
VPDPSLSLDDGAIAPWSAAHVADYFGRLIDALAEELGFSTSTPYEDLPTAARKALLEGHP
TQVHVHYRNRYGRERSYWSSFEGVIPYVVRRHAEAESDMSRERLEGYMREVPCPTCGGTR
LKPVILGVTTRSASLGEKNIAEVAALSIDEAARYLSDLELSERERHIGERVLKEIHERLR
FLLDVGLDYLSLERTAGSLSGGEAQRIRLATQIGAGLVGVLYVLDEPSIGLHQRDNHRLI
ETLIRLRDLGNTLIVVEHDEDTIRASDWVVDIGPGAGEHGGQVLVSGPIDELYASEDSLT
GAYLSGRKEIAVPAERRPRREGHELVVRGAREHNLRGIDVAFPLGQLVAVTGVSGSGKST
LVNDILYTSLARTLYNARTIPGRHKDITGVELVDKVIHVDQSPIGRTPRSNPATYTGVWD
HVRKLFAATPEAKVRGYQQGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCHGA
RYNRETLEVHYKGKTVAEVLDMPIEEALSFFEAIPAISRHLKTLAEVGLGYVRLGQPAPT
LSGGEAQRVKLAAELQKRQTGRTLYVLDEPTTGLHFEDIRKLLGVLGQLVDQGNSVIVIE
HNLDVIKTADWLVDMGPEGGSRGGTLIAEGTPEAVAANPDSFTGQFLKPLLDGRGAKQPV
TQPALDLAPVGRTRKGSGRTASAKAARASAREAAKAVPAAKAAPAKKAVAAKKASPAKKT
VAKKTVAKRTAKKSS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgactgctcatccgcggcgcccgcgagcacaatctcaaggacgtctccctc
gagcttccgcgtgacgcgatgatcgtcttcacgggcctctcgggctccggcaagtcgtcg
ctggcgttcgacaccatcttcgccgagggccagcgccgctacgtcgagagcctctcggcg
tacgcccgccagttcctcgggcagatggacaagcccgacgtcgacttcatcgagggcctg
tcgccggcggtctcgatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
accatcaccgaggtctacgactacctccgtctgctctacgcccgcatcggccacccgcac
tgcccgacctgcggcgagccgatcaccaagcagacgccgcagcagatcgtcgaccggatc
atggagatggaggagggcacccgcttccaggtgctcgcgccggtgatccgcggccgcaag
ggcgagtacctcgatctcttccgtcagctgcagtcccagggatacagccgcgcacgggtc
gacggcgccgtgcacaacctcgccgacgagccgcccaccctggctaagcagaagaagcac
cacatcgaggtcgtcgtcgaccgtctggcggtcaagcccacctcgcagcaacggatcacc
gactccgtggagaccgcgctcaacctcgccgacgggctcgtgctcctcgacttcgtcgac
cttcccgaggacgatccgggtcgggtgcgccggttctccgagaagctggcctgccccaac
gagcacccgctggccgtcgacgagctcgagccccggtcgttctcgttcaacgcgccgttc
ggtgcgtgcccggagtgcagcgggctcggcacccggatggaggtcgaccccgagctcgtc
gtccccgacccgtcgctctccctcgacgacggggcgatcgcgccctggtcggcggcccac
gtcgccgactacttcggacgcctgatcgacgcgctggccgaggagctcggcttctcgacg
tcgaccccgtacgaagacctcccgacggccgcacgcaaggccctgctggagggtcacccg
acgcaggtgcacgtccactaccgcaaccgctacgggcgcgagcgctcctactggagctcc
ttcgagggcgtcatcccgtacgtcgtgcgtcgccacgccgaggcggagtccgacatgagc
cgggagcggctcgagggatacatgcgcgaggtgccgtgccccacctgtggcggcacccgc
ctcaagcccgtgatcctcggcgtcaccacgcgctccgccagcctcggcgagaagaacatc
gccgaggtcgccgcgctgtcgatcgacgaggccgcgcgctacctctccgacctcgagctg
tccgagcgcgagcgccacatcggcgagcgggtgctcaaggagatccacgagcggctccgc
ttcctcctcgacgtgggcctcgactacctgtcgctcgagcgcaccgcgggttcgctgtcc
ggcggcgaggcgcagcgcatccgtctcgccacccagatcggtgcgggcctcgtgggcgtg
ctctacgtgctcgacgagccgtcgatcggtctgcaccagcgcgacaaccaccgcctgatc
gagacgctgatccgcctccgcgacctcggcaacacactcatcgtggtcgagcacgacgaa
gacacgatccgcgcgtcggactgggtcgtcgacatcggtccgggagccggcgagcacggt
ggccaggtgctcgtctcggggccgatcgacgagctctacgcgtccgaggactcgctcacg
ggcgcctacctctccggccgcaaggagatcgccgtccccgctgagcgtcgtccgcggcga
gagggtcacgagctcgtggtccgcggggcccgcgagcacaacctcaggggcatcgacgtc
gcgttcccgctcggccagctggtcgcggtgaccggtgtgtcggggtcgggcaagtcgacc
ctcgtcaacgacatcctctacacgtcgctcgcccgcaccctctacaacgcccgtacgatc
cccggccggcacaaggacatcaccggcgtcgagctggtcgacaaggtcatccacgtcgac
cagtcgccgatcggccgtacgccccgttcgaacccggcaacctacaccggcgtctgggac
cacgtccgcaagctgttcgcggcgacgcccgaggcgaaggtccgcggctaccagcagggc
cggttctcgttcaacgtcaagggcggccggtgcgaggcgtgctccggcgacggcaccatc
aagatcgagatgaacttcctgcccgacgtctacgtcccgtgcgaggtgtgccacggtgcg
cgctacaaccgcgagacgctcgaggtccactacaagggcaagaccgtcgccgaggtcctc
gacatgccgatcgaggaggcgctgagcttcttcgaggcgatccccgcgatctcccgccat
ctcaagacgctcgccgaggtcggtctcggctacgtccgtctgggtcagcccgcaccgacg
ctctcaggaggcgaggcccagcgcgtcaagctggccgccgagctccagaagcgccagacg
ggccggacgctctacgtgctcgacgagccgaccaccggcctgcacttcgaggacatccgc
aagctcctcggcgtcctcgggcagctcgtcgaccagggcaactcggtgatcgtcatcgag
cacaacctcgacgtcatcaagaccgcggactggctggtcgacatgggtcccgagggcggt
tcccgtggtggcacgctgatcgccgagggcacgcccgaggcggtcgccgccaacccggac
agcttcacgggccagttcctcaagccgctgctcgacgggcgcggggccaagcagcccgtc
acgcagccggccctcgacctcgctcctgtcggacgtacccgcaaggggtccggtcgtacg
gcgtcggcgaaggccgcccgtgcgtcggcgcgcgaggccgcgaaggctgtccccgcggcg
aaggccgcgcccgccaagaaggccgtcgccgcgaagaaggcgtcgccggcgaagaagacc
gtggcgaagaagaccgtggcgaagcgaacagccaagaagtcgtcctga
DBGET
integrated database retrieval system
