Mumia qirimensis: AB3M34_13765
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Entry
AB3M34_13765 CDS
T10923
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mqr Mumia qirimensis
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mqr03016
]
AB3M34_13765 (truB)
Enzymes [BR:
mqr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB3M34_13765 (truB)
Transfer RNA biogenesis [BR:
mqr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB3M34_13765 (truB)
Prokaryotic type
AB3M34_13765 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XEK78414
LinkDB
All DBs
Position
complement(2858254..2859144)
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AA seq
296 aa
AA seq
DB search
MSTAPQPTGIVVVDKPPGWTSHDVVGRMRRIAGTRKVGHAGTLDPMATGVLVLGLGRATR
LLGHVAGHDKDYDATIRLGATTVTDDAEGDVVATAVASEVDLDSVRTATLPLIGEIDQVP
SAVSAIKVDGRRAYARVRDGEDVTLPARRVTVERFEVSDLRPGPDATVDVDARVTCSSGT
YVRALARDVGAALGVGGHLTALRRTRVGGFTLAQASTLDQLAEELVVVSLEDAARSAFPS
VDLDAETARIVRHGRALESYALGSAGPVALFDPDGTFLALYDQRGADARSVAVFVG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagcaccgcagcccaccgggatcgtcgtcgtcgacaagcccccaggctggacg
tcgcacgacgtggtcggtcggatgcgtcggatcgcgggcacgcgcaaggtggggcacgcc
ggcacgctggacccgatggcgaccggtgtgctcgtcctcggcctcggccgggccacgcgt
ctgctggggcacgtcgctggtcacgacaaggactacgacgcgaccatccggctcggggca
accaccgtcacggacgacgccgagggtgacgtcgtggcgacggcggtcgcctcagaagtg
gacctggactccgtccgtacggcgacgctgccgctgatcggtgagatcgaccaggtgccg
tcggccgtgtcggcgatcaaggtcgacgggcggcgggcgtacgcacgcgttcgcgacggc
gaggacgtcacgcttccggcccgccgggtgacggtcgagcggttcgaggtctccgacctg
cgacctgggccggacgcgacggtcgacgtcgacgctcgcgtgacctgctcgagcggcacc
tacgtccgggcactggcccgcgacgtcggcgccgcgctcggcgtgggtggacacctgacg
gcgctgcgacgtacccgggtcggcggtttcaccctcgcccaggccagcacgctcgaccag
ctggccgaggagctcgtcgtcgtctcgctcgaggacgccgcgcgctcagcgttcccgtcg
gtcgacctcgacgccgagacggcgcggatcgtgcggcacgggcgcgcgctggagtcgtac
gccctgggctcggccggcccggtggcgctgttcgaccccgacgggaccttccttgcgctc
tacgaccagcggggcgcggacgcgagatcggtcgcggtgttcgtcggctga
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