Mumia qirimensis: AB3M34_18140
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Entry
AB3M34_18140 CDS
T10923
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mqr Mumia qirimensis
Pathway
mqr03420
Nucleotide excision repair
mqr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB3M34_18140 (pcrA)
03430 Mismatch repair
AB3M34_18140 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mqr03400
]
AB3M34_18140 (pcrA)
Enzymes [BR:
mqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3M34_18140 (pcrA)
DNA repair and recombination proteins [BR:
mqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3M34_18140 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AB3M34_18140 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DUF6689
Motif
Other DBs
NCBI-ProteinID:
XEK79264
LinkDB
All DBs
Position
complement(3755962..3758379)
Genome browser
AA seq
805 aa
AA seq
DB search
MSLPFPVPSDRMPGGLRPADARTSPAFPAGGGGGHDRPSDEEIQARREAQAERLLEGLND
PQRAAVTHTGGPLLVVAGAGSGKTRVLTRRIAWMISQHRVHPGSILAITFTNKAAAEMRD
RVADLVGPRARLMWVSTFHSACVRILRKEAQRFGYTSTFTIYDAADSKRLMTQVCRDLEL
DPKRFPPRGVLNWVSNQKNELVDHEAAATRAHNDTERAYASAYSTYQERLRSSNAMDFDD
LIMGTVHLFQAFPDVADSYRRRFRHVLVDEYQDTNHAQYVLIRELCTEPDSDLLVVGDSD
QSIYAFRGANIRNILEFEADFPTATTILLEQNYRSTQSILDAANAVISRNEGRKKKNLWS
AQGTGEQIVGYVADDEHSEAQYVADEVDRLADEGIAKPSDVAVFYRTNAQSRVFEEVFIR
VGLPYRVVGGVRFYERKEIKDAIAYLRVLVNPADSVSLRRILNTPKRGIGDRAEAVVGAY
ADRLRITFWEALQRAEEAPGIATRSLKQISGFVETITGLQELAAAGEPVDVVLEATLARS
GYLDELENSTDPQDEARVENLSELVAVAREFVSDAATLAEPTDVGDAGIEDDEVLEPGSV
AAFLERVSLVADADSIPDSGDGMVTLMTLHTAKGLEFPVVFLTGLEESVFPHMRSLGDPK
ELEEERRIAYVGLTRAEQRLYVTRALVRSAWGAPSHNPASRFLDEIPEELVDWKRTQADT
ATWSGGYLPRRTSAAPMRASAADRASKTKRDVPSLSPGDRVTHDAFGLGTVVALEGVGDR
AVASVDFGSEGVKRLLLRYAPVEKI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcccgtttcccgtgccctcagaccggatgcccggtggtctgcgccctgccgat
gccaggacgtcgccggccttccccgccggcggtggcggcggccacgaccgcccgagcgac
gaggagatccaggcacgccgcgaagcccaggcggagcggctgctggaggggctcaacgac
ccccagcgcgcagccgtcacgcacaccggtggcccgctcctggtggtcgcgggcgccggg
tccggcaagacgcgtgtgctcacccgccgcatcgcgtggatgatctcccagcaccgggtc
caccccggttcgatcctggcgatcaccttcaccaacaaggccgcggccgagatgagggac
cgggtcgccgacctggtgggtccgcgcgcccgcctgatgtgggtctccacgttccactcg
gcgtgcgtccgcatcctccgcaaggaggcgcagcgcttcggctacacctcgacgttcacg
atctacgacgccgccgactccaagcgcctgatgacccaggtgtgtcgcgacctcgagctc
gaccccaagcggttcccgccccgtggggtcctcaactgggtgtccaaccagaagaacgag
ctcgtcgaccacgaggccgcggcgaccagggcacacaacgacaccgagcgcgcctacgcc
tccgcgtactcgacctaccaggagcggttgcggtcgtccaacgcgatggacttcgacgac
ctgatcatgggcaccgtccacctgttccaggcgttccccgacgtcgccgactcctatcgg
cggcggtttcgccacgtgctggtcgacgagtaccaagacaccaaccacgcccagtacgtc
ctgatccgcgagctctgcaccgagcctgactccgacctgctcgtcgtcggcgactccgac
cagtcgatctatgcgttccggggcgccaacatccgcaacatcctcgagttcgaggccgac
ttcccgacggcgacgacgatcctcctcgagcagaactaccgctcgacccagtcgatcctc
gatgccgcgaatgccgtgatctcacgcaacgagggccgcaagaagaagaacctctggtcg
gcgcagggcacgggggagcagatcgtcggctacgtcgccgacgacgagcactccgaggcc
cagtacgtcgccgacgaggtcgaccggctcgccgacgagggcatcgccaagccgtccgac
gtcgccgtcttctaccggaccaacgcgcagtcccgtgtgttcgaggaggtcttcatccgg
gtcggcctcccctacagggtcgtcggcggggtgcggttctacgagcgcaaggagatcaag
gacgccatcgcctacctgcgcgtcctggtcaatcccgccgactccgtgtcgctgcgccgg
atcctcaacacgcccaagcgcggcatcggcgatcgggccgaggccgtggtcggtgcgtac
gccgaccggctccgcatcaccttctgggaggcgttgcagcgtgccgaggaggccccgggc
atcgcgacccggtccctcaagcagatcagcggcttcgtcgagaccatcaccgggctccag
gagctggccgccgccggcgagccggtcgacgtcgttctcgaggccacgctcgcgcggtcc
ggttatctcgacgagctcgagaacagcaccgacccgcaggacgaggctcgcgtcgagaac
ctctccgagctcgtcgccgtcgcccgcgagttcgtctccgatgccgcgacgctcgccgag
cccaccgatgtgggcgacgccggcatcgaggacgacgaggtgctcgagccggggtccgtc
gcggcgttcctcgaacgcgtctcgctcgtcgccgacgccgactcgatccccgactccggt
gacggcatggtcaccctgatgactctgcacaccgccaagggactcgagttcccggtggtg
ttcctcaccggtctcgaggagtcggtgttcccgcacatgcgctcgctcggcgacccgaag
gagctcgaggaggagcgccgcatcgcctacgtgggcctgactcgcgccgagcagcgtctc
tacgtcacgcgcgcgctcgtacgctccgcgtggggcgcgccgtcccacaatccggcgtcg
cgcttcctggacgagatcccggaggagctcgtcgactggaagcgcacccaggccgacacg
gccacctggtccggcggatacctgccgcgccggacgtccgccgcgccgatgcgcgcgtcg
gctgccgaccgcgcgagcaagacgaagcgcgacgtgccgagcctgtcgccgggcgaccgg
gtcacgcacgacgcgttcgggctgggcacggtggtggcgctcgagggtgtcggtgaccgt
gcggtggcgtcggtcgacttcggctccgaaggcgtcaagcgcctgctgctccgctacgcg
cccgtcgagaagatctga
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