Macrosteles quadrilineatus (aster leafhopper): 128993068
Help
Entry
128993068 CDS
T09739
Name
(RefSeq) spliceosome RNA helicase Ddx39b-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mqu
Macrosteles quadrilineatus (aster leafhopper)
Pathway
mqu03013
Nucleocytoplasmic transport
mqu03015
mRNA surveillance pathway
mqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128993068
09122 Translation
03013 Nucleocytoplasmic transport
128993068
03015 mRNA surveillance pathway
128993068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mqu03019
]
128993068
03041 Spliceosome [BR:
mqu03041
]
128993068
Enzymes [BR:
mqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128993068
Messenger RNA biogenesis [BR:
mqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128993068
Spliceosome [BR:
mqu03041
]
Complex C
Other components
EJC/TREX
128993068
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128993068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Chromo
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
128993068
NCBI-ProteinID:
XP_054272802
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MEEEFEIEKILDMRVKDGKTYYLCKWKGYPDEDSTFESEEDLLCLDLIEEFLKSREKREV
VERKNHLNTCKEAEKEENQNVKESKNEVQIQEKNKAIAEEIDAIFDYEDEEQPDQAVVSE
PKEEIGSVEPANDEVIGRYASISTSKFKDHPLKPEILRAIVDCGFEWLSEVQHECIPPAL
LGMDILCQAESGGKTTAFVLATLQKLENTSDNHVYVLVMCHSKELVFQISKEYERFSKYM
PQIKVGGFSGDQPIEKDEEVLKNNCPHIVVGTPGRILALVRSNTLNLKHVGCFVLDECDK
ILEVLDMRRDVQEIFRETPQSKQVMMFSAKLKEEIRPVCKEFMQDVIAVSFVSNKNEMDI
LKSFGIDIPELPEH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagtttgagattgagaaaattcttgacatgagggtaaaagatggaaaaact
tattatctttgcaagtggaagggatatccagatgaagatagtacatttgagtcagaggaa
gatttactctgccttgacctcattgaagaatttcttaaatcaagagaaaagagagaggtg
gtggaacgaaaaaatcatttaaacacttgtaaagaggctgaaaaagaagaaaaccaaaac
gtcaaagaaagtaagaatgaggtgcagatccaagagaaaaataaagctattgctgaggaa
attgatgctatttttgactacgaagatgaggagcagccagaccaggccgtagtatcagaa
ccaaaagaagaaataggatctgtggagcctgccaacgacgaggtcataggaagatacgcc
tcaatctccacttcaaagtttaaagatcacccattgaaaccagaaattttaagagcaatt
gttgactgtggttttgagtggctgtccgaagtgcaacacgaatgtatacctccagcattg
cttggaatggacattttatgtcaggctgagtctggaggtaaaacgactgcttttgtgttg
gcaacacttcaaaagctcgagaacacatccgacaaccatgtctacgtcctggtaatgtgt
cacagcaaagaactggtattccagatcagcaaagagtacgagcgcttctcaaaatacatg
cctcagattaaggtgggaggtttttctggtgatcagcctattgaaaaggacgaggaagtt
ttgaaaaacaactgtccgcatattgtggtgggaactcctggacgtatcctggctttggtg
cgcagcaataccttgaacctgaaacatgtgggatgctttgttcttgatgagtgtgacaaa
atattggaagtattagacatgaggagagacgtccaagaaatattcagagaaactcctcaa
agcaagcaagtgatgatgtttagtgcaaaactcaaagaggagatcaggcctgtctgcaaa
gaatttatgcaagatgtaatcgccgtatcatttgttagtaataaaaacgagatggacatc
ttaaaaagttttggtatagacatacctgaattacctgaacattga
DBGET
integrated database retrieval system
