Macrosteles quadrilineatus (aster leafhopper): 128996272
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Entry
128996272 CDS
T09739
Name
(RefSeq) exosome RNA helicase MTR4-like
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
mqu
Macrosteles quadrilineatus (aster leafhopper)
Pathway
mqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128996272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mqu03019
]
128996272
03041 Spliceosome [BR:
mqu03041
]
128996272
03009 Ribosome biogenesis [BR:
mqu03009
]
128996272
03016 Transfer RNA biogenesis [BR:
mqu03016
]
128996272
Enzymes [BR:
mqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128996272
Messenger RNA biogenesis [BR:
mqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
128996272
Spliceosome [BR:
mqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128996272
Complex C
U4/U6.U5 tri-SnRNP related factors
128996272
Ribosome biogenesis [BR:
mqu03009
]
Eukaryotic type
Pre-60S particles
Helicases
128996272
Transfer RNA biogenesis [BR:
mqu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
128996272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ATPase_2
Motif
Other DBs
NCBI-GeneID:
128996272
NCBI-ProteinID:
XP_054277451
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MADFDDELFNVFDEEIQSSVKDETLDSSKSPEHYPQSSGADESSDAGVKREHSDDESTIE
SKKKKVETILDDINIQQVSHRISVHTVETLEACLHEVAVPPGQEYVPLRVLTGKPAKEYP
FILDPFQKEAIACVDNGRSVLVSAHTSAGKTVVAEYAIARSLGDKQRVIYTTPIKALSNQ
KYREFYEEFQDVGLVTGDVTINPDASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYM
RDKERGVVWEETLILLPDNVHYVFLSATIPNARQFCEWVCYLHHQPCHVVYTDYRPVPLQ
HFVFPAGGEGIHLIVDEKGNFKEDNFNSAMAVLANAGDLAKGDKQLRGRKGGSKTGSDTN
CFKIVKMIMERNFAPVIIFSFSKKDCELYAMQMAKLDFNTLEEKKLVDEVFNNAMDVLSE
VDRTLPQVENVKPLLRRGIGIHHGGLLPILKETIEILFAEGLIKALFATETFAMGLNMPA
RTVLFTGARKFDGKDFRFVTSGEYIQMSGRAGRRGLDDKGIVILMIDEKVSPQEGREIIQ
GKPDPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQAAIPELYQKVQEKQDLYD
SIQIRNESEVASYHHIRDRLDQLSKQFQEFLTRPQYLLPFLQPGRLVKVKSEPSNEEFEW
GVVVNFEKVGANQRGKNPAQEDSELFVHTLLYVRSDGGSTPQPCPLGSPGEIEVVPVKHS
HLCQISSLRIHVPDDLTSPDKKKSVLKTIEQVGKRFPDGVPLLNPETDMKIKDAAFKNIV
SMINTYEQRLFSHPMHEKEELEDVYEQYLEKVKIGAELKLAKAELKKAMSLLQMDELKCR
KRVLRRMGYCTADDVIEMKGRVACELSSGEELLMTELIFNGVFNDLSVPQCVALLSTFVC
DEKSSSNPKMSEELAGPLRQMQELTRRIARVSVEAKLQVDEDSYVEQFKPFLMDVCFSWC
NGASFLEICKMTDIFEGSIIRCMRRLEEMLRQLVQASKNIGNTDLENKFSEAIKLIKRDI
VFAASLYL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttgatgacgaactttttaatgttttcgatgaagaaattcagtcttctgtc
aaggatgaaactcttgactcttctaagagccctgaacactaccctcaaagttctggagct
gacgaatcttctgatgctggagtcaaaagagaacattctgacgacgaatctaccattgaa
tcaaagaagaagaaagttgaaacaatccttgatgacatcaacattcagcaagtgtcccat
aggatatctgttcacaccgtagaaacactggaagcctgtctacatgaggtggctgtaccc
ccaggtcaggagtacgtgcctctgcgggttctcactggtaaaccagccaaagaataccct
ttcatactcgatccgttccaaaaagaagcaatcgcttgtgtagacaacggacggtctgtc
ctggtctcggctcacacttcggctggaaaaactgtggttgcagagtacgcaattgccagg
tctcttggagataagcagcgagtgatctacaccacaccaatcaaagcactcagtaaccag
aagtatcgagagttctacgaggaattccaggacgtgggactcgtcacaggagatgtcact
atcaatcctgacgccagctgtctcatcatgaccactgagattcttcgtaacatgctttac
agaggatcagaagtgatgagagaagtaggatgggtcatattcgacgagattcattatatg
agagataaggaaagaggtgtggtgtgggaggagacgcttatcttactcccggacaacgtc
cactacgtgtttctctccgctacaatccccaacgcacgacagttctgtgagtgggtgtgt
taccttcaccatcagccgtgccacgtcgtctacacggactacagacccgtgcctttgcag
cacttcgtcttccctgcagggggggaggggatccaccttatagtggacgagaagggtaat
tttaaagaagacaattttaactcggcaatggcagtactagccaacgctggtgacttggct
aaaggggacaagcagctcagaggccgtaaaggaggcagcaagaccggaagtgatacaaac
tgcttcaagattgtcaagatgattatggagagaaactttgcccccgtcatcatattttca
tttagcaagaaagactgtgagctgtatgcgatgcagatggctaaacttgattttaatact
ttggaagagaagaagttggtagatgaagtgtttaataatgccatggatgttttatcggaa
gtagatcggactttgcctcaggtggagaacgtaaagccgttgctcagaaggggtatcgga
atccatcatggaggtttattaccaatattaaaagaaacaattgaaatcttatttgctgaa
ggacttataaaggctcttttcgcaaccgaaacatttgcaatgggtttgaacatgcctgcc
agaactgtccttttcactggagcaagaaagtttgatggaaaagattttagatttgtgacc
tcaggagagtacatccagatgtcaggtagagcgggcagacgaggtttggatgacaaaggc
atagtaatcctgatgattgacgagaaagtgagtccgcaggagggtcgggagatcatccag
ggtaaacctgacccgataaactcagcgttccacctaacctacaacatggtgctgaatctg
ctgagggtagaagaaatcaaccctgagtacatgctggagcggtcgttcttccagttccag
aaccaggcggcgatcccggaactgtatcagaaggtgcaagagaagcaagacctgtatgac
agtattcaaatccgcaacgagagcgaggtggcttcgtaccaccacatccgcgacaggctg
gaccagctcagcaaacagttccaggagtttctcaccagaccgcagtacctgctgccgttc
ttacagccgggcagattggtcaaggtgaaaagcgagccgtcaaacgaggagtttgaatgg
ggagttgtggtgaactttgagaaggtcggagccaaccagagaggcaagaacccagcgcag
gaggactcggaactgttcgttcacacattgttgtacgtgaggagtgacggaggcagcact
cctcaaccttgcccactgggcagtcctggggagatagaggtagttccagttaaacattca
cacctctgccagattagctctctgagaattcacgttcctgacgatttgacgtcacccgac
aagaaaaagtccgttttaaaaacaatagagcaagttggaaaaagatttcctgacggcgtt
cctctgctcaaccctgaaacggacatgaagataaaagacgcggctttcaaaaacattgtt
tcaatgataaacacgtatgagcagaggctgttcagccatcccatgcacgagaaagaggag
ttggaagatgtttatgaacagtatctcgagaaagttaagataggagctgaactgaagcta
gcaaaggcggaactaaagaaggcgatgtccctgttacaaatggacgagctcaagtgtcgc
aagcgagtgctgcgcaggatgggatactgcacggcagacgatgtcattgagatgaaaggt
cgtgtcgcttgtgaactcagcagtggagaggaattgctgatgacggagttgatattcaac
ggtgtgttcaatgacctctcagtgccccaatgtgtggcgttgctgagtacgtttgtgtgt
gacgagaaaagctcatcgaaccccaaaatgtcagaagagctcgccggtcccctcagacag
atgcaggaattaacaagaagaatagctcgagtgagtgttgaagctaaacttcaagtggat
gaagactcgtatgtggagcagttcaaaccttttctgatggacgtttgcttcagttggtgc
aatggagcgagttttctcgaaatatgcaaaatgactgacatctttgagggaagtataatt
aggtgtatgcgaagactagaagaaatgctaagacaactggttcaagcatcaaagaatata
ggcaacacggacctagaaaataagttcagtgaagccataaaactaataaagagggacata
gtgtttgcagctagcttgtacctgtaa
DBGET
integrated database retrieval system
