Macrosteles quadrilineatus (aster leafhopper): 128999734
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Entry
128999734 CDS
T09739
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mqu
Macrosteles quadrilineatus (aster leafhopper)
Pathway
mqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128999734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mqu03019
]
128999734
03041 Spliceosome [BR:
mqu03041
]
128999734
Messenger RNA biogenesis [BR:
mqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128999734
Spliceosome [BR:
mqu03041
]
Complex B
Other components
Prp19-related factors
128999734
Complex C
128999734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_2
TPR_8
TPR_15
TPR_12
NRDE-2
RPN7
Mad3_BUB1_I
ARM_TT21_C
PPR
TPR_10
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
128999734
NCBI-ProteinID:
XP_054282361
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MPVYTKKTVDLIFNEEDLPYEEEILRNPFSVKHWLRYIEHKKDAPKNAVNIIYERALKEL
PGSYKLWYNYLKLRRRQVKGRCITDPSYEDVNNAFERSLVFMHKMPRIWLDYCQFLVDQC
LITRTRQVFDRALRALPITQHHRIWPLYLAFLKRHDIPETAVRVFRRYLKLCPEDTEDYI
EYLTSIERLDEAAVKLAYIVNKEDFVSKHGKSNHQLWNELCELISKNPDKVRSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKVMEEMSSKTNPTEEDDVEVEIRLARFEHLIERRLLLLNSVLLRQNPHNVHEWLKR
VKLYEGKPHDIINTYTEAVQTVDPKLAVGKPHTLWVSFAKFYEAAGQIEDARVVLEKATL
VPYVKVDDLASVWCEWAEMEIRHENYDGALRLMQRATVMPARKVAYHDETETVQMRVYKS
LKLWSMYADLEESFGTFKSCKSVYDRIIDLKIATPQIIINYGLFLEEHNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYEGTKLERARDLFEQCLENCPAKFAKALYLLYAKLE
EDHGLARHAMAVYERATAAVLPEEQFELFNIYIKKAADIYGVPRTRQIYEKAIEVLQEEN
CREMCLRFAEMETKLGEIDRARAIYAHCSQVCDPRVTADFWQTWKEFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSAASNVSGTVADLAPGAKDGMRMLEAKAAEMAAEDRT
AQVKGGNILFVRGETQGQDRDGTDTTRVLNPDEINIDEDDHDVNDSSEEEDDVPVEKQTI
PSEVFGSLKKDDEDSS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtacacaaaaaaaactgtcgatctcatatttaatgaagaggatttgccatat
gaagaagagatattacgaaatcctttttcagtaaaacattggttacgatacatagagcat
aaaaaagatgctcccaaaaatgcagttaacattatttacgagagagcactcaaggaatta
cctggcagctacaaactttggtacaattatttgaaactcagaagaagacaagtgaaagga
cgttgcattacagacccatcttacgaagatgtcaacaatgcttttgaaagatcacttgtt
ttcatgcacaagatgccgaggatctggctggactactgtcagtttctggtggaccagtgt
ctcatcactcgtacgaggcaggtgtttgaccgagcgttacgagcgctgccgatcactcag
caccatcgtatctggccgctctaccttgcgttcctcaagagacacgacattccagaaact
gccgtccgagtcttccggcggtacctcaagctgtgtccagaagataccgaggattatata
gaatatttgacctctattgagaggttagatgaagcagctgtaaaactagcatacatcgtc
aacaaggaagattttgtgtcgaaacatggaaaatcaaaccaccagttgtggaatgagttg
tgtgagctgatatccaagaaccctgataaagtgagatcactgaacgtagatgctataatc
cgaggagggttaagaaggtacacagaccaactcggccacctgtggaactcattggctgac
tattatgtgaggagtggactttttgagagggcaagagacatctatgaagaagccatccag
acagtaacgacagtgagagatttcacacaagtgtttgatgcttacgctcagtttgaagag
ttgagtctgagtaaagtcatggaggaaatgtcttccaaaaccaatccaactgaagaagat
gacgtggaggtagagattcggctggcaaggttcgaacacctgattgagcgacggctgttg
ctgctcaattctgtccttctgagacaaaatccacacaacgttcatgaatggctcaagaga
gtcaaactgtacgaagggaagccacatgacataataaatacgtacacagaagccgtacaa
actgttgaccccaaactagccgtgggtaagccgcacactctgtgggtgtcatttgccaag
ttctacgaggcggctggacagatagaagacgccagggtagtgttggagaaggcgacgttg
gtgccttacgtcaaggtagacgaccttgcgtctgtgtggtgcgagtgggccgagatggag
atcagacacgagaactatgacggagcactacgtttgatgcagagagccacagtgatgcca
gcgcgcaaggtggcatatcacgacgagacagaaactgttcagatgagagtgtacaagtca
ctcaaactgtggtccatgtacgccgacttagaggaaagctttggcacattcaagtcctgc
aaatccgtgtatgatagaatcattgacttaaagattgcaacaccacagattattatcaac
tacggactcttccttgaagaacacaactactttgaagaagcttttagagcttatgagaaa
ggcatagctctattcaaatggcccaatgtgtacgacatttggaacacttatctgacaaaa
tttctcaagaggtacgaaggcacgaagcttgagagggctcgagatttatttgagcaatgt
ctagaaaactgtccggctaagtttgccaaagccctgtacctactgtatgccaagctggaa
gaggaccatggcttggcccggcatgcaatggcagtttacgagagagccactgcggctgta
ctacctgaagaacagtttgagctattcaacatctacatcaagaaggcagcggacatctac
ggagtgcctaggacgaggcagatctatgagaaggccattgaggtgctgcaagaagagaac
tgcagagagatgtgtctcaggtttgctgagatggagacaaagttaggagagatagacaga
gccagagccatttacgcacactgcagccaagtgtgtgaccccagggtgacagctgatttc
tggcagacgtggaaagagtttgaggttcgtcacgggaatgaagacacgatgagagagatg
ctcaggataaaacgcagtgtacaggctacatacaatactcaggtgaacatgatgtcagca
caaatgttgtcggctgccagcaatgtatctggcacagtggcagacctggcccctggtgcc
aaagatggaatgcgtatgctggaggctaaggctgctgagatggccgctgaggacaggaca
gcacaagtgaagggtgggaacattctctttgtacggggagagacgcagggccaggatcgt
gatgggacggacaccactagagtcctcaaccctgacgagatcaacattgatgaggatgac
cacgacgtcaacgattcgtctgaggaagaagatgatgtccctgtggaaaaacaaactatt
ccttctgaggtgtttggcagtttgaagaaagatgatgaagattcaagttaa
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