Macrosteles quadrilineatus (aster leafhopper): 129000043
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Entry
129000043 CDS
T09739
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mqu
Macrosteles quadrilineatus (aster leafhopper)
Pathway
mqu03013
Nucleocytoplasmic transport
mqu03015
mRNA surveillance pathway
mqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129000043
09122 Translation
03013 Nucleocytoplasmic transport
129000043
03015 mRNA surveillance pathway
129000043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mqu03019
]
129000043
03041 Spliceosome [BR:
mqu03041
]
129000043
Enzymes [BR:
mqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129000043
Messenger RNA biogenesis [BR:
mqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129000043
Spliceosome [BR:
mqu03041
]
Complex C
Other components
EJC/TREX
129000043
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129000043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129000043
NCBI-ProteinID:
XP_054282870
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQPEQAVVDGSGDPPKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLENTSDNHVYVLVMCHT
RELAFQISKEYERFSKYMPQIKVGVFFGGLPIQKDEEVLKNNCPHIVVGTPGRILALVRN
KKLNLKHLKHFVLDECDKMLELLDMRRDVQEIFRETPHSKQVMMFSATLGKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDILEFNQVVIFVKSVQRCMA
LATLLSEQNFPAVAIHRGMLQEERLKKYQEFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDTDTYLHRVARAGRFGTKGLAITFASDENDANILNNVQDRFDVNITELPEEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgatgatcttttggactacgaagatgaggagcagccagaacaggccgta
gtagacggatctggggatcctcccaagaaagaggtcaaaggaacctacgtctcaattcac
agttcagggtttcgagatttcctcttgaaaccagaaatcttaagagctattgttgactgt
ggttttgaacatccgtccgaggttcaacacgaatgtatacctcaagcagtgcttggaatg
gacatcttatgtcaggctaagtctggaatgggtaaaacggctgtttttgtgttggcaaca
cttcaacagctcgagaacacttctgacaaccatgtctacgtcttggtaatgtgtcacacc
cgagaactggcattccagatcagcaaagagtacgagcgcttctcaaaatacatgcctcag
attaaggtgggagtctttttcggtggtctgccaattcaaaaggacgaggaagttttgaaa
aacaattgtccgcatatagtggtgggaactccaggacgtatccttgctttggtgcgcaac
aagaagttaaacctgaaacatttgaagcactttgttcttgatgagtgtgacaaaatgttg
gaactattagacatgagaagagacgtccaggagatattcagagaaactccacacagcaag
caagtgatgatgttcagcgcaacactcggcaaggagatcaggcctgtctgcaaaaaattt
atgcaagatcctatggaagtctacgttgacgacgaagccaagctgacacttcatggactc
cagcagcattatgtcaaactgaaggagaatgagaagaacaaaaaactgtttgaactttta
gacatacttgagttcaatcaggtggtcatctttgtcaagtcagtgcagcgctgcatggcg
ttggcaactcttctctctgagcagaacttccctgccgtcgccatccatcgaggaatgctc
caggaggaaagactgaagaaatatcaggagttcaaggatttccaaaagcgtattctggtg
gccacgaatctgtttggtagaggtatggacatagagagagtcaacattgtgttcaactat
gacatgcctgaggatacagacacatacttgcacagagtggcgcgagctggtcgatttggt
accaagggacttgccataacatttgcgagcgatgaaaacgatgccaacatcttgaacaac
gtgcaagacagattcgatgtaaacatcactgaactccccgaagaaattgacctctcatcc
tacattgaaggacgttaa
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