Mycobacterium tuberculosis H37Ra: MRA_2709
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Entry
MRA_2709 CDS
T00540
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mra
Mycobacterium tuberculosis H37Ra
Brite
KEGG Orthology (KO) [BR:
mra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mra03016
]
MRA_2709
Enzymes [BR:
mra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MRA_2709
Transfer RNA biogenesis [BR:
mra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MRA_2709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF7696
Motif
Other DBs
NCBI-ProteinID:
ABQ74483
UniProt:
A5U633
LinkDB
All DBs
Position
3008707..3010023
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AA seq
438 aa
AA seq
DB search
MCPEPSHAGAAESEGTESEPTPLLRPAGGIPDLCVTVGEIAAAAELLDRGRGPFAVDAER
ASGFRYSGRAYLIQIRRAEAGTVLIDPVSHGGDPLTVLAPVAEVLSTNEWILHSADQDLP
CLAEVGMRPPALYDTELAGRLAGFDRVNLAAMVERLLGLGLTKGHGAADWSKRPLPSAWL
NYAALDVELLIELRAAISRVLAEQGKTDWAAQEFEHLRSFESRPPPAAARQDRWRRTSGI
HKVHDRRGLAAVRELWTARDRIAQRRDIAPRRILPDSAIIDAAIADPKSVDDLVALPVFG
GRNQRRSAAVWWAALAAARESPDPPEIAEPANGPPPPGRWVRRKPAAAARLDAARAALTE
VSQRVRVPTENLVSPDLVRRLCWEWEDISQSSPDPIAAVEAYLRTGQARAWQLELVVPIL
TAALTGAPDAGAQGDDGS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtgccccgagccgtctcacgcgggagctgctgagtccgaaggcacggaatcggaaccc
acccccttgctccggcccgccggtgggataccggatctgtgtgtgaccgtcggtgaaatc
gccgctgccgcagaactactggaccgcgggcgcggaccgttcgcggtagacgccgagcgg
gcgtcgggtttccgctactccggccgcgcctacctgattcagatccggcgggccgaggcc
ggcaccgtactgatcgacccggtcagccacggcggtgacccgttgaccgtgctggcgccg
gtcgccgaggtgctcagcaccaacgagtggatcctgcactccgccgatcaggatctgccc
tgtctcgccgaggtcggtatgcgaccgccagcgctatacgacaccgagcttgccgggcgc
ctggccgggttcgatcgagtgaacctggcggccatggtcgagcggttacttggactggga
ttgaccaagggccacggcgcggccgactggtccaagcgcccgctaccctcggcctggctg
aactacgcggcgttggacgtggaactgctcatcgaactacgcgcggcgatctcgcgggtg
ctggccgagcaaggcaaaaccgattgggctgcgcaggaattcgagcacctgcggtcgttc
gaatcaaggccacccccagcggccgcccggcaggaccgctggcgacgaacctcgggtatc
cacaaagtgcatgaccggcgggggctggccgcggtccgcgaattgtggacagcgcgtgac
cgaatcgcccagcgccgcgacatcgcgccccgccggatcttgccggactcggccattatc
gatgccgccatcgccgacccaaagtcagtcgacgaccttgtcgcgttaccggtgttcggc
ggacgcaaccaacgtcgcagcgcggctgtgtggtgggcggcactggcagccgcacgcgaa
agcccagatccgccggagatcgccgaaccggcaaacgggccgccgccgccggggcggtgg
gtcagacggaaaccggcagccgccgcacggctggatgcggcgcgcgcggcgctgacggag
gtgtcgcaacgggtgcgggtaccgaccgagaacctggtctcacctgatctggtgcgacgg
ctgtgttgggaatgggaggacatctcgcagagttctccagacccgattgccgctgtcgag
gcgtacctgcgcaccggccaggcacgggcctggcagctcgaactagtggtccccatcctg
accgcggcgttgacaggggctccggacgccggcgcccagggcgatgatggctcttag
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