Meiothermus ruber DSM 1279: Mrub_0136
Help
Entry
Mrub_0136 CDS
T01193
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mrb
Meiothermus ruber DSM 1279
Pathway
mrb00061
Fatty acid biosynthesis
mrb00071
Fatty acid degradation
mrb01100
Metabolic pathways
mrb01212
Fatty acid metabolism
mrb02024
Quorum sensing
mrb04146
Peroxisome
Module
mrb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mrb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Mrub_0136
00071 Fatty acid degradation
Mrub_0136
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Mrub_0136
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mrub_0136
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mrb01004
]
Mrub_0136
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrb04147
]
Mrub_0136
Enzymes [BR:
mrb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Mrub_0136
Lipid biosynthesis proteins [BR:
mrb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Mrub_0136
Exosome [BR:
mrb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Mrub_0136
Exosomal proteins of breast cancer cells
Mrub_0136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADD26916
UniProt:
D3PL20
LinkDB
All DBs
Position
112356..114296
Genome browser
AA seq
646 aa
AA seq
DB search
MMPSGYELKKYTLPQVLQMRAKAMPKQVAIREKDLGIWNEITFADYYRHVTRFAAGLLAL
GFEKGERLAVIADNIPEWLYAELATQALGGISVGVYQSSLPPEIAYVLSYTGAAFVVAED
QEQVDKLLEIRSEIPSVRKVIYEDPKGMRAYRDDPWIIGFDEVERLGEEYLQKHPQAVEE
RIAQGHPEDVCHLSLTSGTTGRPKAAMLRHRNLLHMGVALQEIDPLKPTDDYLSFLPFAW
IGEQMMSVGMALAGGFAVNMPESVETAMSDLKEIGPHVMFSPPRVWEGTQSQIWVRISET
YAFNRWVYQQMLKIGYRAADYRMRGRPMPLGLRLAYWFADQIMFKPLRDQLGFLRLRRAY
TGGAALGPDVFRFYHAIGVNLKQIYGQTEIIGIAFVHRDGDVRADTVGLPIPGGEVKISE
RGEILCRSDAVVAGYWQNPEATAETFADGWLHTGDAGYLTPEGHLVVIDRVSDVMHTSAQ
QMFSPQFIENKLKFSPYIKEAVVFGDQKPFLTAFINVDPQTVGKWAEDRRIAYTTYIDLS
QKPQVAELIRKEVQRVNEGLPEHLRIQRFVLLYKLLDADDDELTRTGKVRRKFIMQRYQP
IVDALYSGTDKVQVDTEFKYQDGTVQKVSVEVRVLEADGKPEIVGV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatgccttcgggctacgaactcaagaaatacaccctcccgcaggtgctgcaaatgcgg
gctaaagcgatgcccaagcaggtggccatccgcgagaaggatctgggcatctggaacgag
atcacctttgctgactactaccgccacgtgacccgtttcgctgcgggtcttttggccctg
ggcttcgaaaaaggggagcggctggcggtaatcgccgacaacatccccgagtggctctac
gccgaactggccacacaggctctagggggcatctcggttggtgtgtaccagtcctcgttg
ccccccgagatcgcctatgtgctctcctacaccggggcggccttcgtggtggccgaagac
caggagcaagtagacaaactcctggaaatccgcagcgaaattcccagcgtgcgcaaggtc
atctacgaagatcccaaagggatgcgggcctaccgcgacgacccctggattatcggcttc
gacgaggtggagcggctgggcgaggaatacctgcagaagcatccccaggccgttgaggag
cgcatcgcccagggccatcccgaggacgtttgccacctctcgctcacctccggcaccacg
ggccgccccaaggccgccatgctgcggcaccgcaacctgctgcacatgggggtggccctg
caggagattgatcccctaaagcccaccgacgactacctgtcgttcttgcccttcgcctgg
attggcgagcagatgatgtcggtggggatggccctggccggtgggtttgccgttaacatg
cccgagtcggtggagaccgccatgagcgacctcaaggagatcgggccgcacgtgatgttc
agcccgcccagggtctgggagggtacacagagccagatctgggtgcgcatctccgagacc
tacgccttcaaccgctgggtctaccagcagatgctcaaaattggctaccgcgccgccgac
tatcgcatgcgcggcagacccatgcctctaggattgcgcctggcctactggttcgccgat
cagattatgttcaagcccttgcgcgaccagctcggctttttgcggttgcgtcgggcctat
accgggggggcggcgctgggcccggatgtcttccgcttttaccatgccattggggtcaac
ctcaagcaaatctacggccagaccgagattatcgggattgccttcgtgcaccgcgacggc
gatgtgcgggccgacacggtggggcttccgatccccggcggtgaggtcaaaatcagcgag
cgcggcgaaattctatgccgatcggacgcggtggtggcgggctactggcagaaccccgag
gccaccgccgagaccttcgccgatggctggttgcacaccggcgacgccggctacctcacg
cccgaggggcacctggtggtgatcgaccgggtatcggacgtgatgcataccagcgcccag
cagatgttcagtccgcagtttatcgagaacaaactcaagtttagcccctacatcaaagaa
gcggtggtctttggcgaccagaagcccttcctgaccgccttcatcaacgtagacccccag
accgtgggcaaatgggccgaggatcgccggattgcctataccacctacatcgatctatcg
caaaaaccgcaggtggccgagcttattcgcaaagaagtccagcgcgtcaacgaggggctg
cccgagcacctgcgcattcagcgcttcgtgctgctttacaagctgctcgatgccgacgac
gacgagctaacccgcaccggcaaggtacgccggaagttcatcatgcagcgctaccagccc
attgtggatgctttgtatagcggcaccgacaaggtacaggtggataccgagttcaaatac
caagacggcacggtgcaaaaagtctcggtggaggtacgggtgctcgaggccgacggaaag
cctgaaatagtgggggtgtag
DBGET
integrated database retrieval system
