Meiothermus ruber DSM 1279: Mrub_1089
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Entry
Mrub_1089 CDS
T01193
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mrb
Meiothermus ruber DSM 1279
Pathway
mrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mrub_1089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrb03019
]
Mrub_1089
03110 Chaperones and folding catalysts [BR:
mrb03110
]
Mrub_1089
03029 Mitochondrial biogenesis [BR:
mrb03029
]
Mrub_1089
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrb04147
]
Mrub_1089
Enzymes [BR:
mrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Mrub_1089
Messenger RNA biogenesis [BR:
mrb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Mrub_1089
Chaperones and folding catalysts [BR:
mrb03110
]
Heat shock proteins
HSP60 / Chaperonin
Mrub_1089
Mitochondrial biogenesis [BR:
mrb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Mrub_1089
Exosome [BR:
mrb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mrub_1089
Exosomal proteins of other body fluids (saliva and urine)
Mrub_1089
Exosomal proteins of breast cancer cells
Mrub_1089
Exosomal proteins of colorectal cancer cells
Mrub_1089
Exosomal proteins of bladder cancer cells
Mrub_1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADD27853
UniProt:
D3PQX0
LinkDB
All DBs
Position
1093877..1095514
Genome browser
AA seq
545 aa
AA seq
DB search
MAKMLVFDEAARRSLERGMNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVSVAKEVE
LEDHLENIGAKLMIEIASKTNDITGDGTTTATVLGQAIVREGLRNVAAGANPLDLKRGIE
KAVDVAIKSIQELAVPVNDRKAIFEVASVSANNDAEIGNLIADAMEKVGREGVITVEESK
SLDTELNFVEGYQFDKGYISPYFVNNPDTMEAQLDEPFILITEKKISNVRELLPVLEQVA
QTGKPLLIIAEDVEGEALATLVVNRLRGTLNIAAVKAPGFGDRRKEMLKDLAAITGGTVI
SEELGFKLENATLSMLGRAERVRINKDETTVVGGKGKKEDIEARINGIKKELETSDSEYA
KEKLQERLAKLAGGVAVIRVGAATETELKEKKHRYEDALSTARAAVEEGIVPGGGVALLR
AVPAIKNLIKELDGDEATGAKIVLRAIEEPARQIAANAGYEGSVVVNNILSKKEKNYGFN
AATGEYGDMMEWGIVDPAKVTRTALQNAASIGSLILMTEAVVAEKPEEKKAPAAPAGGMG
GDMDF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatgctagtttttgatgaagctgcacgccgtagcctcgagcgcggcatgaac
gcggtagccaatgctgtaaaggtgaccctgggcccccgtgggcgcaacgtggtgctggag
aagaaattcggcagccccaccattaccaaagacggggttagcgtagccaaggaggtcgag
ctggaggaccacctcgagaacatcggcgccaagctgatgatcgagatcgcctccaagacc
aacgacatcaccggtgacggtaccaccactgctaccgtgctgggccaggccatcgtgcgt
gagggtctgcgcaacgtggccgccggggccaaccccctcgacctcaagcgcggcattgag
aaggccgtggatgtggccatcaagagcatccaggagctggccgtacccgtcaacgaccgc
aaggccatcttcgaagtggctagcgtatcggccaacaacgacgccgagatcggcaacctg
atcgccgatgccatggagaaggtgggccgcgagggtgtcatcaccgttgaggagtccaag
agcctcgacaccgagctcaacttcgtggaagggtatcagttcgacaagggctacatctcg
ccctacttcgtcaacaaccccgacacgatggaggcccagctcgatgagcccttcatcctg
atcaccgagaagaagatcagcaacgtgcgcgagctgctgccggtgctcgagcaggttgcc
cagaccggcaagcccctgctcatcattgccgaagacgtcgagggtgaggccctggcaacc
ctggtggtcaaccgcctgcgcggtaccctcaacatcgctgctgtcaaggcccctggcttt
ggtgaccgccgcaaggagatgctcaaagacctggcggccatcaccggtggtaccgtgatc
agcgaagagctgggcttcaagctggagaacgccaccctctccatgctgggccgcgccgag
cgggtgcgcatcaacaaggatgagaccaccgtggtgggcggcaagggcaagaaggaagac
atcgaggcccgcatcaacggcatcaagaaggagctcgagacctccgacagcgagtacgcc
aaggagaaactgcaggagcgcctggccaagctggctggtggcgtggctgtgatccgcgtg
ggtgctgctaccgagaccgagctcaaggagaagaagcaccgctacgaggacgccctctcc
acggcccgcgccgcagtggaggaaggcatcgtgcccggtggtggtgtggccctgctgcgc
gccgtgcccgccatcaagaacctgatcaaggagctcgatggtgatgaggccaccggtgcc
aagattgtgctgcgcgccatcgaagagcccgcccgccagattgctgccaacgccggctac
gagggcagcgtggtggtcaacaacatcctcagcaagaaagaaaagaactacggcttcaac
gcggccaccggtgagtacggcgacatgatggagtggggcatcgtggacccggccaaagtg
acccgtacggccctgcagaacgccgcttccatcggctcgctgatcctcatgaccgaggct
gtggtggccgagaagcccgaagagaagaaggcccctgctgcgcccgctggcggcatgggt
ggcgacatggacttctaa
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