Meiothermus ruber DSM 1279: Mrub_1356
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Entry
Mrub_1356 CDS
T01193
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mrb
Meiothermus ruber DSM 1279
Pathway
mrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mrub_1356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrb03400
]
Mrub_1356
Enzymes [BR:
mrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Mrub_1356
DNA repair and recombination proteins [BR:
mrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mrub_1356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADD28118
UniProt:
D3PRN5
LinkDB
All DBs
Position
complement(1386888..1387688)
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AA seq
266 aa
AA seq
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MKYGFHMSIAGKLGIAGAAQEAELLGLGAVQIFAKSPRSWKTRNLKPGEVEGFRARKENL
GGLPTVIHASYLVNLAAEGELGQKSVFSLADDLAKAQALGAQYVVVHPGSGSAQTARANA
LRALELAQLSQSGPRLLLENTAGGGEKLGARLDTLAQMIEGTRLGVCFDTCHAFAAGYHL
EEALDGLERLVGLERVPVIHLNDSVGERGAQIDHHANLMEGRIGPELRRFALDARLRDKV
FILETPRGAQEDAHNLRVLREWLAHP
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtacggttttcatatgtccatcgccggcaaactcggcatcgccggcgcagcccag
gaagccgagctgctggggcttggcgccgtccagattttcgccaagagcccgcgcagttgg
aaaacgcgcaacctcaaaccgggtgaagtagagggcttcagggcccgaaaggaaaacctg
ggtggtctgcccacagtcattcacgcctcctacctggtaaacctggctgccgaaggcgag
ctagggcaaaaaagcgttttcagcctggccgacgatctggccaaagcccaggcgctgggg
gcccagtatgtggtggtacacccaggctcgggatcggcccagacagcccgggccaacgcc
ctccgggcgctcgagctggcccagctaagtcaaagcgggccccgcctgcttctggagaac
accgccggaggcggcgaaaaactgggggctcgcctggataccctggcccagatgatcgag
ggcacccggctgggggtttgcttcgatacctgccacgcctttgccgcagggtatcacctc
gaggaggccctggacgggctcgagcggttggtgggcctggagcgggttccggtaattcac
ctcaacgactcggtgggcgagcggggcgcccagatcgaccaccacgccaatctaatggag
ggccggatcgggccggaactccgccgctttgccctggatgccaggctgcgcgacaaggtc
tttatcctggaaaccccccgtggtgcacaggaagacgcccacaacctgcgggtgctgagg
gagtggctggcccacccctag
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